Pairwise Alignments

Query, 299 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 311 a.a., Transcriptional regulator, LysR family from Xanthomonas campestris pv. campestris strain 8004

 Score =  134 bits (337), Expect = 3e-36
 Identities = 91/292 (31%), Positives = 145/292 (49%), Gaps = 19/292 (6%)

Query: 9   LQLIYLFVHLVNAGSFSQAAKDLDMPIATVSRKLAKLEEKLDKQLFMRSTRKLRLTEEGL 68
           L  + +FV +     FS AA  LD   A ++R++A LE++L  +L  R+TR++ LT  G 
Sbjct: 4   LDAMRVFVAVAERSGFSAAADALDRSTANITRQVAALEQRLGTRLLNRTTRRVSLTSAGT 63

Query: 69  ALFQRYQSVIAQFDELS---GIGSDKPEGTLRIAAPISIISIIFIHALNEFGRLYPDIRL 125
           A +QR   ++A  D+L    G  +  P G LR+ AP+S   +     L  F   +P + L
Sbjct: 64  AYYQRCLQLLADLDDLEATVGAQALAPSGLLRVNAPVSFGIVQLAALLPGFRARFPQVEL 123

Query: 126 HISQSNELVDLIDKGIDVAIVGGAQPDSSWVSSTLGELDYRLFATPEYLAHAPELTHPDD 185
            +S S+ LVD++++G DVA+    QP  + ++  LG +     A P YLA A    HP D
Sbjct: 124 DLSLSDRLVDMVEEGFDVALRITRQPAPTLIARQLGTVRLVPCAAPAYLARAGTPQHPAD 183

Query: 186 LENHQLIKVWPLFNWHLKHPNGESFYFNGPTKLTLTDLHGAIQATLDH---------GGI 236
           L  H+ +    L+++    P G+   F+GP       L G ++A   H          G+
Sbjct: 184 LAGHECL----LYHY---APTGDDVRFHGPDGDIDVRLRGGLRANNGHVLSAAAVAGQGV 236

Query: 237 LYGPELFVKQQIKEGRLKVLLPEWIGEQRRISILYHQRSQQPLKVRVFIEFM 288
           +  P+    + I  GRL  +LP++      I  +Y  RS    KVR FI+++
Sbjct: 237 VIQPDFLADEHIAAGRLVRILPDYHLADIGIYAVYTSRSHLAPKVRSFIDYL 288