Pairwise Alignments

Query, 299 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 291 a.a., LysR family transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  132 bits (333), Expect = 7e-36
 Identities = 91/285 (31%), Positives = 146/285 (51%), Gaps = 7/285 (2%)

Query: 14  LFVHLVNAGSFSQAAKDLDMPIATVSRKLAKLEEKLDKQLFMRSTRKLRLTEEGLALFQR 73
           LFV +  A SF +AA+ L MP +T+SR++++LE+ +  +L  R+TRK+ LTE G   ++R
Sbjct: 9   LFVEVARARSFRKAAEALGMPNSTLSRRVSELEKAIGLRLLHRTTRKIELTEAGQLYYER 68

Query: 74  YQSVIAQF---DELSGIGSDKPEGTLRIAAPISIISIIFIHALNEFGRLYPDIRLHISQS 130
            + ++ +     E  G   ++P G LR++ P+++ +      + EF R YP I      +
Sbjct: 69  SKRIVDEARLAHEQLGAMLNQPSGVLRVSLPVNLATFYLTPIIGEFARHYPGITFEFDLT 128

Query: 131 NELVDLIDKGIDVAIVGGAQPDSSWVSSTLGELDYRLFATPEYLAHAPELTHPDDLENHQ 190
              VDL+ +  DVAI  G   DS  ++  +G     L+A+P Y+  + E   P +L  H+
Sbjct: 129 PRRVDLVAEPFDVAIRIGKLEDSGLITRLIGRHSRHLYASPGYIEASGEPATPAELAEHE 188

Query: 191 LIKVWPLFNWHLKHPNGESFYFNGPTKLTLTDLHGAIQA-TLDHGGILYGPELFVKQQIK 249
            I +     W L H            + TL  + G I+A  ++H GI   PE  V + + 
Sbjct: 189 CIGMLRSPIWSL-HQGINKVDVAVRGRFTLNSV-GMIRALAVNHQGIALLPEKIVAEDVA 246

Query: 250 EGRLKVLLPEWIGEQRRISILYHQRSQQPLKVRVFIEFMQSKAPE 294
            GRL+ +LPEW G    I  +   R   P K + FIEF+ S+  E
Sbjct: 247 FGRLRRILPEWQGSAVSIFAVTETR-LIPAKTQRFIEFLSSRLME 290