Pairwise Alignments

Query, 299 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 306 a.a., LysR family transcriptional regulator from Ralstonia sp. UNC404CL21Col

 Score =  142 bits (357), Expect = 1e-38
 Identities = 94/279 (33%), Positives = 143/279 (51%), Gaps = 5/279 (1%)

Query: 14  LFVHLVNAGSFSQAAKDLDMPIATVSRKLAKLEEKLDKQLFMRSTRKLRLTEEGLALFQR 73
           LFV +V+ GS   AA+  ++P AT++R+L KLE  L  QL +RS R L+ T EG   +++
Sbjct: 7   LFVSIVDHGSLQAAARHANLPPATLTRRLQKLETSLGCQLLLRSARSLKPTPEGQLYYEQ 66

Query: 74  YQSVIAQFDELSGIGSD---KPEGTLRIAAPISIISIIFIHALNEFGRLYPDIRLHISQS 130
            + ++    + +    D   + +GTLR+ AP+++   +   A   F   +P+IRL +S S
Sbjct: 67  CRPLLTALAQTTATLDDDLNQVKGTLRVLAPLNLSRGLLAPAYASFMATWPEIRLELSLS 126

Query: 131 NELVDLIDKGIDVAIVGGAQPDSSWVSSTLGELDYRLFATPEYLAHAPELTHPDDLENHQ 190
           N   D+   G D+AI  G Q D       LG +   L  +P Y+A     +HP DL+ H+
Sbjct: 127 NSNEDVWRHGADMAIRVGQQDDPKLRQRRLGVIGMVLVGSPAYVAAHGAPSHPHDLQAHR 186

Query: 191 LIKVWPLFNWHLKHPNGESFYFNGP-TKLTLTDLHGAIQATLDHGGILYGPELFVKQQIK 249
           L+   PL  W    P+GE      P  +  L D+   +       G+LY P     Q ++
Sbjct: 187 LLVSSPLSTWRFTSPDGEETIELQPHGRCDLNDIELGVTLAETGLGLLYCPHTLCHQALE 246

Query: 250 EGRLKVLLPEWIGEQRRISILYHQRSQQPLKVRVFIEFM 288
            GRL  LLPEW   QR I  ++ Q+ Q P KVR  +E +
Sbjct: 247 AGRLIRLLPEWRTPQRPIYAVWPQQ-QLPRKVRTLLEHL 284