Pairwise Alignments

Query, 299 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 303 a.a., DNA-binding transcriptional regulator, LysR family from Paraburkholderia bryophila 376MFSha3.1

 Score =  135 bits (340), Expect = 1e-36
 Identities = 88/290 (30%), Positives = 147/290 (50%), Gaps = 9/290 (3%)

Query: 8   ELQLIYLFVHLVNAGSFSQAAKDLDMPIATVSRKLAKLEEKLDKQLFMRSTRKLRLTEEG 67
           +L  I +FV +  +GSFS+AA+ L MP++TVSRK++ LEE+L   L  R+TRKL LT +G
Sbjct: 6   DLNDIAVFVRVAQSGSFSRAAQALGMPVSTVSRKVSALEERLGVTLLQRTTRKLSLTGQG 65

Query: 68  LALFQRYQSVIAQFDELSGIGSD---KPEGTLRIAAPISIISIIFIHALNEFGRLYPDIR 124
            A   +    +A   +   + +    KPEG LRI+ P+ +    F   ++ F   YP I+
Sbjct: 66  RAYLDQCSEPLAHLYDAERVITQTQKKPEGVLRISGPVMLEQEPFYAFMSAFMNDYPQIQ 125

Query: 125 LHISQSNELVDLIDKGIDVAIVGGAQPDSSWVSSTLGELDYRLFATPEYLAHAPELTHPD 184
           + +  +N  +DLI + +DVAI  G   DSS V+  +G    +L  + +Y  + P  + PD
Sbjct: 126 VDLYFTNAFIDLIAENVDVAIRFGQLQDSSLVAQRVGRSVRQLVVSADYARNHPLPSRPD 185

Query: 185 DLENHQLIKVWPLFN---WHLKH-PNGESFYFNGPTKLTLTDLHGAIQATLDHGGILYGP 240
           +L  H  + +    N   WHL +       + +GP  +   D H      L   G+   P
Sbjct: 186 ELSQHPCVLINARNNETEWHLVNGRKAARVHVSGP--VAARDFHIVHAFALRGHGVALLP 243

Query: 241 ELFVKQQIKEGRLKVLLPEWIGEQRRISILYHQRSQQPLKVRVFIEFMQS 290
             +    I  G L  +LP+W   +  +  +Y  R   P +++ F++ +++
Sbjct: 244 SSYCDPHIARGELVRVLPDWSSPELFVHAVYPTRRFMPSRLKAFLDALKA 293