Pairwise Alignments

Query, 299 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 321 a.a., transcriptional regulator, LysR family from Paraburkholderia bryophila 376MFSha3.1

 Score =  130 bits (326), Expect = 5e-35
 Identities = 92/298 (30%), Positives = 152/298 (51%), Gaps = 11/298 (3%)

Query: 9   LQLIYLFVHLVNAGSFSQAAKDLDMPIATVSRKLAKLEEKLDKQLFMRSTRKLRLTEEGL 68
           LQ + +FV +V AGSF+ AA+  +     +SR +++LE  L  +L  RSTR+L LT  G 
Sbjct: 4   LQNMRVFVRVVEAGSFTAAAQSFNSTTGAMSRAVSELEAHLRTRLLNRSTRRLALTTAGE 63

Query: 69  ALFQRYQSVIAQFD---ELSGIGSDKPEGTLRIAAPISIISIIFIHALNEFGRLYPDIRL 125
              +R Q ++A  D   E +    ++P G LR+ +  SI     + A+  +  LYPD+ +
Sbjct: 64  RYLKRCQQILADIDTAEEEASCAHERPSGALRMHSFASIGQHYVLPAIAHYRALYPDVTV 123

Query: 126 HISQSNELVDLIDKGIDVAIVG-GAQPDSSWVSSTLGELDYRLFATPEYLAHAPELTHPD 184
            ++ S  + DL +   DVA++G  A PDS  VS  LG     L A+P Y+        P 
Sbjct: 124 ELTLSQRMPDLFEGSADVAVIGASALPDSDLVSFPLGTTFSILCASPSYVKTHGAPKRPA 183

Query: 185 DLENHQ-LIKVWPLF---NWHLKHPNG-ESFYFNGPTKLTLTDLHGAIQATLDHGGILYG 239
           DL +H+ LI   P F    W L  PNG E+   +GP ++ + +    + A  +  GI   
Sbjct: 184 DLADHECLILQTPAFAPHEWILDGPNGSEAMQIDGPVQVNIAE--SLVVAIREGMGIGMV 241

Query: 240 PELFVKQQIKEGRLKVLLPEWIGEQRRISILYHQRSQQPLKVRVFIEFMQSKAPELFS 297
           P       +++G L  +LP++  ++  +  LY  R     K R ++EF+++  P++ +
Sbjct: 242 PLYAAIAGLRDGTLIRVLPDYTLQKMHVYALYPSRKFIDAKTRTWVEFLRAHLPKVIA 299