Pairwise Alignments

Query, 299 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 334 a.a., transcriptional regulator from Burkholderia phytofirmans PsJN

 Score =  132 bits (332), Expect = 1e-35
 Identities = 91/289 (31%), Positives = 151/289 (52%), Gaps = 11/289 (3%)

Query: 9   LQLIYLFVHLVNAGSFSQAAKDLDMPIATVSRKLAKLEEKLDKQLFMRSTRKLRLTEEGL 68
           LQ + +F  +V+  SF++AA+ LD+P A+V+  +  LE  L  +L  R+TR+L LT +G 
Sbjct: 4   LQAMQVFTRVVDTNSFTRAAETLDLPRASVTTIIQNLEAFLGTRLMHRTTRRLSLTPDGA 63

Query: 69  ALFQRYQSVIAQFDELSGI---GSDKPEGTLRIAAPISIISIIFIHALNEFGRLYPDIRL 125
           A ++R   ++A  +E       G+ KP G LRI  P SI  ++ I +L EF   YPDI L
Sbjct: 64  AYYERCVRILADVEETEASFQSGNKKPHGKLRIDMPGSIGRLLVIPSLCEFHTRYPDIDL 123

Query: 126 HISQSNELVDLIDKGIDVAIVGGAQPDSSWVSSTLGELDYRLFATPEYLAHAPELTHPDD 185
            +  ++  VDL+ +G+D  +  GA  DSS V+  +G  +    A P+Y+  A   T  +D
Sbjct: 124 QLGLTDRPVDLLQEGVDCVVRVGALQDSSLVARRIGLFEGVTCAAPDYIERAGMPTSLED 183

Query: 186 LENHQLIKVWP-----LFNWHLKHPNGESFYFNGPTKLTLTDLHGAIQATLDHGGILYGP 240
           LENH+ +  +        +W     +G+       + +++ D    +   L+  G++   
Sbjct: 184 LENHKAVNYFSSRTGRTLDWAFL-VDGKEIEVKMKSIVSVNDADAYVTCGLEGFGLIQPA 242

Query: 241 ELFVKQQIKEGRLKVLLPEWIGEQRRISILY-HQRSQQPLKVRVFIEFM 288
              V   ++ G+L  +LPE       IS +Y H R   P KVRVF++++
Sbjct: 243 LFMVLPHLRSGQLVEVLPELKPLPMPISAVYPHSRHLSP-KVRVFVDWI 290