Pairwise Alignments

Query, 299 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 312 a.a., LysR family transcriptional regulator from Burkholderia phytofirmans PsJN

 Score =  134 bits (337), Expect = 3e-36
 Identities = 88/293 (30%), Positives = 142/293 (48%), Gaps = 8/293 (2%)

Query: 9   LQLIYLFVHLVNAGSFSQAAKDLDMPIATVSRKLAKLEEKLDKQLFMRSTRKLRLTEEGL 68
           LQ + +FV +V AGSF+ AA+ L+   A  SR ++ LE  L  +L  R+TR++ LTE G 
Sbjct: 4   LQNMRVFVRVVEAGSFTGAAQHLNTTTAYASRAVSDLEAHLRTRLLNRTTRRIALTEAGE 63

Query: 69  ALFQRYQSVIAQFDELSGIGSD---KPEGTLRIAAPISIISIIFIHALNEFGRLYPDIRL 125
              QR + ++A  D+     SD   +P G L++ A  S      + A+  +   YPD+++
Sbjct: 64  RYLQRCEQILAYVDQAEAEASDAHARPSGKLKVHAMTSFGQHYVVPAVGRYQERYPDVQI 123

Query: 126 HISQSNELVDLIDKGIDVAI-VGGAQPDSSWVSSTLGELDYRLFATPEYLAHAPELTHPD 184
            ++ +  + DL+D+G DV++ +  + PDS  VS  LG       A+P YL        P 
Sbjct: 124 ELTLAQRMPDLLDEGFDVSLTLATSLPDSGLVSQRLGSAFSIACASPAYLERHGVPQTPA 183

Query: 185 DLENHQLIK----VWPLFNWHLKHPNGESFYFNGPTKLTLTDLHGAIQATLDHGGILYGP 240
           DL  H+ ++    V+P   W    PNGE     G T   +        A     G+   P
Sbjct: 184 DLTRHECLQMVTPVFPTEKWIFDGPNGEETIALGATSFQVNVAEAMAVAVSSGMGVGLIP 243

Query: 241 ELFVKQQIKEGRLKVLLPEWIGEQRRISILYHQRSQQPLKVRVFIEFMQSKAP 293
                  +++G L  LLPE+  +   +  LY  R     K+R ++EF++ + P
Sbjct: 244 IYSAISGLRKGELVWLLPEYTSQPMNLYALYPSRQYLDAKIRTWVEFLRDELP 296