Pairwise Alignments

Query, 299 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 295 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  152 bits (384), Expect = 9e-42
 Identities = 97/284 (34%), Positives = 151/284 (53%), Gaps = 14/284 (4%)

Query: 15  FVHLVNAGSFSQAAKDLDMPIATVSRKLAKLEEKLDKQLFMRSTRKLRLTEEGLALFQRY 74
           F  +  +GSF +AA+ L MP++T+SR++ +LE  L  +L  R   ++ LT  G   F+R 
Sbjct: 13  FCAVARSGSFKEAAQSLGMPLSTLSRRIRQLETDLQLRLLNRDAHRVILTSIGEQYFERS 72

Query: 75  QSVIAQFDELSGIGSD------KPEGTLRIAAPISIISIIFIHALNEFGRLYPDIRLHIS 128
              +A FDEL+ I  D      +P+G +RI+API+  +        +F   YPDI+L +S
Sbjct: 73  ---VALFDELNNIDEDLHRDKYQPQGKIRISAPINSGTHFLRSIFYDFLLQYPDIQLDLS 129

Query: 129 QSNELVDLIDKGIDVAIVGGAQPDSSWVSSTLGELDYRLFATPEYLAHAPELTHPDDLEN 188
            SN L+D+  +G+DVA   G     +W++  L  + + L + P+Y      +T PD L  
Sbjct: 130 FSNSLIDIEAEGMDVAFRVGNPVVENWIARPLKHIHFILCSHPDY--DISSITTPDKLCG 187

Query: 189 HQLIKVWPLFNWHLKH-PNGESFYF--NGPTKLTLTDLHGAIQATLDHGGILYGPELFVK 245
           H  I   P+  W L H   GE F +  N   +L + +L     A     GI Y P+ F  
Sbjct: 188 HPTIICHPMIPWQLVHKTTGEEFDYHPNKGVRLEVDELMLLTHAIKTGIGIGYVPDYFAL 247

Query: 246 QQIKEGRLKVLLPEWIGEQRRISILYHQRSQQPLKVRVFIEFMQ 289
             I +G +  +LPEW  + R +S+LY  R   P++VR+FIEF++
Sbjct: 248 PMIAQGEVNHVLPEWSSKARTLSMLYRDRDHLPMRVRLFIEFVK 291