Pairwise Alignments

Query, 449 a.a., RNA methyltransferase, TrmA family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 415 a.a., putative RNA methyltransferase from Phaeobacter inhibens DSM 17395

 Score =  145 bits (365), Expect = 3e-39
 Identities = 133/443 (30%), Positives = 205/443 (46%), Gaps = 48/443 (10%)

Query: 16  SAKQSFSVQQLDHLGAGIAQHQGKVVFIPGALPNETVQAQLTEQKKNYARAKLIKVETPS 75
           +A+ + ++ +L H G G+A+     +F P  LP ETV        ++  +   I++E PS
Sbjct: 4   AARTTATIIRLGHQGDGVAEGP---LFAPRTLPGETVSGI-----RDGHQLSDIRIENPS 55

Query: 76  TERVSPLCPHYHTCGGCDLQHMSLTAQREHKSAALVDIMAKFAGAEG---SLAPALSGEG 132
             RV   C HY +CGGC LQH    A  +  +   +DI+     A+G      P  +   
Sbjct: 56  EARVQAPCRHYKSCGGCQLQH----ATDDFVAGWKIDIVRNALAAQGLETEFRPIHTSPP 111

Query: 133 WHYRRRARLATLFDKNTKQLSL-GFRASSSSHVVSITECLVLAKPLSDLIAPFAKLLNQL 191
              RR    ATL  + TK+ ++ GF   +S  +  I +C +LA  L   I P A+ L  +
Sbjct: 112 QSRRR----ATLSVRRTKKGAMAGFHGRASGVITEIPDCQLLAPQLLSAI-PMAEALAMV 166

Query: 192 AA--KSSLGHLELIAADNGHFAVIRITKSLNDKDMAKLAQFAEQHQIHICLQDNEGEFHG 249
            A  K+ L  + +  ++ G   ++   K L+      LAQ  + H  HI     E E  G
Sbjct: 167 GASRKAPLS-VTVTLSEVGVDVLVTNGKPLDGPLRIALAQVVDAH--HIARLTWEDELIG 223

Query: 250 VNGTLLLPVYQLLDDKTDVQPVSLTFTPGNFVQVNAQINKAMVAQALDWLAPQPGERILD 309
           +      P            P  +   PG F+Q       A++A   D +     +RI+D
Sbjct: 224 MEQAPTQPF----------GPAHVCPPPGAFLQATRDGEAALLAAVKDCVVG--AKRIVD 271

Query: 310 LFCGMGNFSLPLARMGADVIGVEGVPEMVSQAREN-AVANGLSNLT------FYHGDLSA 362
           LF G G F+LPLA+  A+V  VEG   M+         A GL  +T      F +  L+ 
Sbjct: 272 LFAGCGTFTLPLAK-NAEVHAVEGESSMLRALDAGWRQAKGLKKVTTETRDLFRNPLLAE 330

Query: 363 DLSSEPWMGKIDKLLLDPARAGAYESLQWLKKMKPRQVVYVSCNPASLARDSAVLLERGY 422
           DL+  P+    D  ++DP RAGA   +  L   + ++V YVSCNP + ARD+ +L + GY
Sbjct: 331 DLN--PFGAAFDVAVIDPPRAGAEAQVTQLVTARTKRVAYVSCNPVTFARDAKILTDGGY 388

Query: 423 KLQKLGLIDMFPQTHHIEAMALF 445
           +L  + ++D F  + H E  A F
Sbjct: 389 RLDWVQVVDQFRWSSHCELAASF 411