Pairwise Alignments

Query, 449 a.a., RNA methyltransferase, TrmA family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 454 a.a., RNA methyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  155 bits (391), Expect = 3e-42
 Identities = 121/450 (26%), Positives = 207/450 (46%), Gaps = 33/450 (7%)

Query: 30  GAGIAQHQGKVVFIPGALPNETVQAQLTEQKKNYARAKLIKVETPSTERVSPLCPHYHTC 89
           G  IA+    V+F+P  +P + V  Q+  +K  YA A+ +K    S  R  P C HY  C
Sbjct: 5   GKAIAKVNDLVIFVPYVVPGDVVDLQIKRKKNKYAEAEAVKFHELSPVRAVPFCQHYGVC 64

Query: 90  GGCDLQHMSLTAQREHKSAALVDIMAKFAGAE-GSLAPALSGEGWHYRRRARLATLFDKN 148
           GGC  Q +  + Q  +K   + D + +    E   ++P L      + R     T  +K 
Sbjct: 65  GGCKWQVLPYSEQIRYKQKQVEDNLRRIGKIELPEISPILGSAKTEFYRNKLEFTFSNKR 124

Query: 149 -------------TKQLSLGFRASSS-SHVVSITECLV---LAKPLSDLIAPFA-----K 186
                         +  ++GF    +   V++I +C +   ++  + + +  +A      
Sbjct: 125 WLTNDEVRQDVKYDQMNAVGFHIPGAFDKVLAIEKCWLQDDISNRIRNAVRDYAYEHDYS 184

Query: 187 LLNQLAAKSSLGHLELIAADNGHFAVIRITKSLNDKDM---AKLAQFAEQH--QIHICLQ 241
            +N    +  L +L +  +  G   VI I K   D +M    +L QF      +I   L 
Sbjct: 185 FINLRTQEGMLRNLIIRTSSTGELMVIVICKITEDHEMELFKQLLQFIADSFPEITSLLY 244

Query: 242 DNEGEFHGVNGTLLLPVYQLLDDK-TDVQPVSLTFTPGNFVQVNAQINKAMVAQALDWLA 300
               + +     L + V++  D    +++ +     P +F Q N++    +   A ++  
Sbjct: 245 IINNKCNDTINDLDVHVFKGKDHMFEEMEGLRFKVGPKSFYQTNSEQAYNLYKIAREFAG 304

Query: 301 PQPGERILDLFCGMGNFSLPLARMGADVIGVEGVPEMVSQARENAVANGLSNLTFYHGDL 360
               E + DL+ G G  +  ++R    VIG+E VPE +  A+ NA  N + N  FY GD+
Sbjct: 305 LTGKELVYDLYTGTGTIANFVSRQARQVIGIEYVPEAIEDAKVNAEINEIKNALFYAGDM 364

Query: 361 SADLSSE--PWMGKIDKLLLDPARAGAYES-LQWLKKMKPRQVVYVSCNPASLARDSAVL 417
              L+ E     G+ D ++ DP RAG ++  +  +   +P+++VYVSCNPA+ ARD   L
Sbjct: 365 KDMLTQEFINQHGRPDVIITDPPRAGMHQDVVDVILFAEPKRIVYVSCNPATQARD-LQL 423

Query: 418 LERGYKLQKLGLIDMFPQTHHIEAMALFEL 447
           L+  YK++ +  +DMFP THH+E + L EL
Sbjct: 424 LDGKYKVKAVQPVDMFPHTHHVENVVLLEL 453