Pairwise Alignments

Query, 230 a.a., b-type cytochrome, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 224 a.a., cytochrome b/b6 domain-containing protein from Rhodopseudomonas palustris CGA009

 Score =  122 bits (306), Expect = 6e-33
 Identities = 71/194 (36%), Positives = 107/194 (55%), Gaps = 10/194 (5%)

Query: 8   VRVWDLSTRFFHWAMVALMALLWWSADAGEMQ--WHQIFAYSLLILIGFRLLWGLFGSDT 65
           V  WD  TR F WA+V ++   W S   G     WH++  Y+ L+LI FR+LWG  G  T
Sbjct: 6   VVAWDGPTRVFKWALVFVVLDGWISNTYGGAYPAWHKLNGYTALVLIVFRILWGFVGGST 65

Query: 66  AKFSHFVHHPKVVLAYLKDVRSKGLSVVLGHNPMGGYMVIALITIISLQLVTGLFVTDD- 124
           A+F  FV  P  VLAY+ D +       LGHNP+GG+MV+AL+ ++    ++GLF  D+ 
Sbjct: 66  ARFGSFVAMPGKVLAYIADKKK-----FLGHNPLGGWMVVALLALVLAMAISGLFSADED 120

Query: 125 -VFTEGPLYSYVSSDTSTFLTWLHKMNFNVILLLIVVHVLAVVVHAVKG-DKLVGAMLSG 182
            +  EGPL   V+  T       H+  F  I + + +HV A V++A+   + L+ AM++G
Sbjct: 121 RLIIEGPLAKTVADATVDTAALWHRRIFTAIEVFVALHVAANVIYALTSREPLIQAMITG 180

Query: 183 YKRIPQRENAIAAK 196
            K      + +AA+
Sbjct: 181 RKPADTYADMLAAE 194