Pairwise Alignments

Query, 365 a.a., A/G-specific adenine glycosylase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 355 a.a., A/G-specific DNA-adenine glycosylase from Pseudomonas syringae pv. syringae B728a

 Score =  358 bits (919), Expect = e-103
 Identities = 175/344 (50%), Positives = 232/344 (67%), Gaps = 8/344 (2%)

Query: 7   FATRIVNWYDNHGRKTLPWQQDKTPYRVWVSEIMLQQTQVATVIPYYQRFMQRFPNVLAL 66
           F++ +++WYD HGR  LPWQQD TPYRVWVSEIMLQQTQV+TV+ Y+ RFM+  P V AL
Sbjct: 6   FSSAVLDWYDRHGRHDLPWQQDITPYRVWVSEIMLQQTQVSTVLSYFDRFMEALPTVQAL 65

Query: 67  ANAPDDEVLHHWTGLGYYARARNLHKAAKMIRDEYQGQFPTDFEQVLALPGIGRSTAGAV 126
           A AP+DEVLH WTGLGYY RARNL K AK++  E+ G+FP D E+++ LPGIG STAGA+
Sbjct: 66  AEAPEDEVLHLWTGLGYYTRARNLQKTAKIVVAEHGGEFPRDVEKLILLPGIGLSTAGAI 125

Query: 127 LSLSLGQHHPILDGNVKRVLARHGAIEGWPGQKPVEERLWQLTEQLTPQQDIQKYNQAMM 186
            SLS+G   PILDGNVKRVLAR  A EG+PG+  V ++LW   E+ TP   +  Y QAMM
Sbjct: 126 ASLSMGIRAPILDGNVKRVLARFTAQEGYPGEPKVAKQLWATAERFTPHSRVNNYTQAMM 185

Query: 187 DIGASICTRSKPNCAACPVAVDCKAQLMGRQTDFPGKKPKKTIPEKSAWMLVLF-KDNQV 245
           D+GA++CTRSKP+C  CP+   C+A ++G +T +P  KP+KT+P+K   M +L  +D  +
Sbjct: 186 DLGATLCTRSKPSCLLCPLERSCEAHMLGLETRYPIPKPRKTVPQKRTLMPMLANEDGAI 245

Query: 246 FLAKRPPAGIWGGLWCFPEFSSEAALNTELEAQGYQPTQLEPLIGFRHTFSHFHLDIQPM 305
            L +RP +G+WGGLW  PE      L         Q  +   L G  HTFSHF L I+P 
Sbjct: 246 LLYRRPSSGLWGGLWSLPELDDFDDLQHLATQHALQLGEHHELPGLIHTFSHFQLSIEPW 305

Query: 306 LLDLDKWASGKPSVGAIMEQNQSLWYNINQPSKVGLAAATERVL 349
           L+ +      + S   + E +  LWYN+  P ++GLAA  +++L
Sbjct: 306 LVKV------RESADHVAEADW-LWYNLATPPRLGLAAPVKKLL 342