Pairwise Alignments

Query, 365 a.a., A/G-specific adenine glycosylase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 378 a.a., adenine glycosylase from Herbaspirillum seropedicae SmR1

 Score =  308 bits (788), Expect = 2e-88
 Identities = 161/360 (44%), Positives = 220/360 (61%), Gaps = 24/360 (6%)

Query: 6   SFATRIVNWYDNHGRKTLPWQQDKTPYRVWVSEIMLQQTQVATVIPYYQRFMQRFPNVLA 65
           SF+  ++ W   HGR  LPWQ  +  YRVW+SEIMLQQTQVA VIPYYQRF++R P+V A
Sbjct: 24  SFSAAVIAWQKQHGRHKLPWQNTRDAYRVWLSEIMLQQTQVAAVIPYYQRFLERCPDVFA 83

Query: 66  LANAPDDEVLHHWTGLGYYARARNLHKAAKMIRDEYQGQFPTDFEQVLALPGIGRSTAGA 125
           LA AP ++V+  W+GLGYY RARNLHK A+ + ++Y G+FP D + +  LPGIGRSTA A
Sbjct: 84  LAAAPSEDVMALWSGLGYYTRARNLHKCAQRVVEQYGGRFPDDPDLLADLPGIGRSTAAA 143

Query: 126 VLSLSLGQHHPILDGNVKRVLARHGAIEGWPGQKPVEERLWQLTEQLTPQQDIQKYNQAM 185
           + + S G+   ILDGNVKRV AR   I+G+PG KP+E++LW     L P QDI+ Y Q +
Sbjct: 144 IAAFSYGRRAAILDGNVKRVFARVFGIDGYPGAKPIEDKLWLRAVALLPDQDIESYTQGL 203

Query: 186 MDIGASICTRSKPNCAACPVAVDCKAQLMGRQTDFPGKKPKKTIPEKSAWMLVLFKDNQV 245
           MD+GA++C R KP C  CP+A  C A    R  + P  KPKK +PE+   MLV+     V
Sbjct: 204 MDLGATLCVRGKPACERCPLAGRCVALAQDRVAELPVSKPKKAVPERETVMLVITHGEDV 263

Query: 246 FLAKRPPAGIWGGLWCFPEFSSEAALNTEL----------EAQGYQPTQLEPLIGFRHTF 295
            L +RP +GIWGGL   PE +   A   +           E QG +  +L+P   F H F
Sbjct: 264 LLEQRPDSGIWGGLLSLPEIAVGGAAQFDTAVRTLVAPYGELQGCR--KLQP---FSHVF 318

Query: 296 SHFHLDIQPMLLDLDKWASGKPSVGAIMEQNQSLWYNINQPSKVGLAAATERVLANLGSL 355
           +HF L + P  + +    S + + GA+      +WY + +  +  L A  +++L  LG+L
Sbjct: 319 THFKLHVAPFQVAMQS-RSQRIAEGAL------VWYPVARLGEAPLPAPVKKLL--LGAL 369