Pairwise Alignments

Query, 615 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 638 a.a., FIG01211069: hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  327 bits (837), Expect = 1e-93
 Identities = 191/586 (32%), Positives = 319/586 (54%), Gaps = 24/586 (4%)

Query: 35  ASASVTAQSESEKANALFETIFMENIMASPIAQTYMGIKQDYDKWDEIGDEADALELAR- 93
           A  +   QS++++   L++  +  ++  +P+  T+ G  +  D+       A   +    
Sbjct: 65  AVVAPVVQSKAQQLTLLYDQYWDASLKLNPLQATFQGESRYNDQLPNFLSPAFRQQSHDF 124

Query: 94  TQKQLAEINQLDASKLDPQTRLSLALLTQNLNNDIKDYQWRYHTYPVNQMRGGHSMIASF 153
           T   LA++  +    L  Q  LS  +  ++  + +   Q+     P+NQ       IAS 
Sbjct: 125 TTLWLAKVEAIGPDGLSGQDLLSYQIFVRDARSALAAEQFPSWMLPINQFYN----IASI 180

Query: 154 LI------NQHQITDVSDAKAYISRLNGVPKRLTQLQKALEVRAEKGIIAPKFVFGYVIS 207
            +             V D   +  R  G+P    Q    +    + G++ PK +   V+ 
Sbjct: 181 AVVMGSGTGAQPFNTVKDYDNWSRRALGIPDLFDQAITNMRAGMQAGVVQPKALMEKVLP 240

Query: 208 DSQNILKGAPFDKNEDSALLADFRKKVKALSIPETEKAPLIAEAEKALTSQVAPAYKALI 267
               I+  +     E+S      R       +PE +K  + AE ++ +  ++ PAY+AL 
Sbjct: 241 QLDAIIARSA----EESLFWGPIRNL--PADMPEADKQRITAEYKRMIEFRIMPAYRALR 294

Query: 268 SYIKT--LEAKADTRDGVWKLPDGDAFYNNALARTTTTDMTADEIHQLGLAEVERIHNEM 325
            +I T  L A  DT  G+  LP+G A+Y   + ++TT+D+T  +IHQ GL EV R+  E+
Sbjct: 295 GFIATEYLPACRDTA-GLAALPNGAAWYAYDVRQSTTSDLTPAQIHQTGLDEVARLQGEI 353

Query: 326 RAIMKKVHFNGTLQAFFAFMRNNPQFYYPNTPEGKAAYLADATQLIDNMHSRLDEVFKVK 385
           + + K+V F G L  F+ FM+ + +F + +  E   AY      L   + + +  +F  +
Sbjct: 354 QNVAKQVKFRGNLPKFYKFMQTDKRFVFRSESELLDAYRG----LQSRVQAAVPRLFATQ 409

Query: 386 PKAAMIVKQVESFREKSAGKAFYEQPAPDGSRPGSYYANLYDMKAMPKYQMEALAYHEGI 445
              A+ V+ VE  R ++A    Y +P P  + PG +Y N  ++ A P+++ E+L  HEG+
Sbjct: 410 GIPALDVRPVEPQRAQAAASGSYMRPNPHDNTPGIFYVNTSNLPARPRWEGESLFLHEGV 469

Query: 446 PGHHMQIAISQELKDIPKFRKFGGYTAYIEGWGLYSESFPKEMGLYADPYSDFGRLAMEL 505
           PGHH Q+ + Q+L D+PKFR+FGG TA+IEGWGLY+ES  +E+GLY DPY+ +G L   L
Sbjct: 470 PGHHYQLGLQQQLTDLPKFRRFGGETAFIEGWGLYAESLGRELGLYQDPYNYYGYLQNAL 529

Query: 506 WRACRLVVDTGIHAKKWTREQGIAYYVDNTPNAKSDAVKMVERHIVMPSQATAYKVGMIK 565
            R+ RLVVDTG+H++ WTR Q I Y + N+   + DA   V+R++ +P QA AYKVG +K
Sbjct: 530 LRSIRLVVDTGLHSQGWTRAQAIDYMLQNSAVTREDAEAEVDRYLAIPGQALAYKVGEMK 589

Query: 566 LLELRHKAEKQLGDKFDIRDFHTLILANGALPLDVLEEHVNQWIAS 611
           + +LR +A+++LG +FD+R FHT +L +G++PL++L++ V +WIA+
Sbjct: 590 ISQLREQAQRELGPRFDVRAFHTEVLKDGSVPLEILQDKVQRWIAT 635