Pairwise Alignments

Query, 615 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 619 a.a., FIG01211086: hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  267 bits (683), Expect = 9e-76
 Identities = 184/618 (29%), Positives = 301/618 (48%), Gaps = 51/618 (8%)

Query: 8   SLIAFALTTLLALPTSAVPSLNDSHNVASASVTAQSESEKANALFETIFMENIMASPIAQ 67
           S+IA +L +++A   +A P        ASA  T+ ++  KA    E  + +  +A  + +
Sbjct: 14  SVIAASLCSVVAPVQAAAP--------ASAVQTSAAQRFKALYTREWRWRQAQLAGAVDE 65

Query: 68  TYMGIKQD-YDKWDEIGDEADALELARTQKQLAEINQLDASKLDPQTRLSLALLTQNLNN 126
                +    D   ++      +  A  Q+ L E++ +  ++L  + +++  +  Q L+ 
Sbjct: 66  DNQATQSGPADHLPKVDVATQQMRTAYWQQVLKELDAIPMAQLSAEDQVNAQVYRQQLDV 125

Query: 127 DIKDYQWRYHTYPVNQMRG-----GHSMIASFLINQHQITDVSDAKAYISRLNGVPKRLT 181
            +    +R    P N         G S  A+    Q       D + Y+  L  +P+   
Sbjct: 126 LLDQQHFRAWEMPFNSDSAFWSDLGFSAEATLRTRQ-------DYQRYLKMLADIPRYFG 178

Query: 182 QLQKALEVRAEKGIIAPKFVFGYVISDSQNILKGAPFDKNEDSALLADFRKKVKALSIPE 241
           +    +     +G   P+           ++++     K E +   A F++    L  P 
Sbjct: 179 EQTDNMRAGLARGFSQPRVTLTGRDQSIADVVQA----KGEANPFYAPFKQMPATL--PA 232

Query: 242 TEKAPLIAEAEKALTSQVAPAYKALISYIKTLEAKADTRDGVW--KLPDGDAFYNNALAR 299
            E+A L  +A + +   V PAY  L+S+I+  E +   RD +    LPDG A+Y   +  
Sbjct: 233 AEQAQLRQQALQVIAQHVVPAYAKLLSFIRE-EYQPRARDTLAGEALPDGAAYYRAQIRE 291

Query: 300 TTTTDMTADEIHQLGLAEVERIHNEMRAIMKKVHFN-----GTLQAFFAFMRNNPQFYYP 354
            TT D++ ++IHQ+GL EV ++  +M   +    F          AF  F+R +PQFY  
Sbjct: 292 FTTLDLSPEQIHQIGLQEVAKLRTQMDQTIVASGFKPPAGQAVFPAFLQFLRTDPQFY-A 350

Query: 355 NTPEGKAAYLADATQLIDNMHSRLDEVFKVKPKAAMIVKQVESFREKSAGKAFYEQPAPD 414
            TPE     L  A  +   + +++ +     P+    ++ V               P   
Sbjct: 351 KTPE---ELLKQAAWIAKRVDAKVGDYIGRLPRQRFAIEPVPPELA----------PFYT 397

Query: 415 GSR--PGSYYANLYDMKAMPKYQMEALAYHEGIPGHHMQIAISQELKDIPKFRKFGGYTA 472
           G R  PG Y  N Y++ + P Y + AL  HE  PGH +Q+ ++ E +D+P+FR++   +A
Sbjct: 398 GGRGGPGIYLVNTYNLPSRPLYNLTALTLHESSPGHALQMPLAAEAQDLPEFRRYSFISA 457

Query: 473 YIEGWGLYSESFPKEMGLYADPYSDFGRLAMELWRACRLVVDTGIHAKKWTREQGIAYYV 532
           Y EGW LYSE   +EMG+Y  PY  FG L  ++WRACRLV+DTGIH + WTR Q IAY  
Sbjct: 458 YGEGWALYSEYLGQEMGMYETPYDRFGYLTYQMWRACRLVIDTGIHHQGWTRAQAIAYLR 517

Query: 533 DNTPNAKSDAVKMVERHIVMPSQATAYKVGMIKLLELRHKAEKQLGDKFDIRDFHTLILA 592
           DNT  ++ +    V+R+I  P QA +Y +G +K+LELR KAE  LG+ FD+R FH  +L 
Sbjct: 518 DNTALSEHEVTTEVDRYIAWPGQALSYYLGELKILELRRKAEAALGETFDLRHFHDAVLQ 577

Query: 593 NGALPLDVLEEHVNQWIA 610
            G++PL VLE  ++++IA
Sbjct: 578 TGSVPLPVLEARIDRFIA 595