Pairwise Alignments

Query, 615 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 600 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

 Score = 94.7 bits (234), Expect = 1e-23
 Identities = 134/627 (21%), Positives = 243/627 (38%), Gaps = 79/627 (12%)

Query: 14  LTTLLALPTSAVPSLNDSHNVASASVTAQSESEKANALFETIFMENIMASPIAQTYMGIK 73
           L  L  L     P    +   A  +  AQS   +  AL +      +  SP+  T +G  
Sbjct: 8   LALLAGLSACQQPEPPRAGTAAVTAQDAQSPDARFAALSKHALDTWMQLSPVNATQVGDH 67

Query: 74  QDYDKWDEIGDEADALELARTQKQLAEINQLDASKLDPQTRLSLALLTQNLNNDIKDYQ- 132
           +   + D++        L   ++ L E++ LD SKL  + ++  A+L   L ++I + + 
Sbjct: 68  RFDSQLDDLSTAGRQRSLDAGKQLLTELDALDVSKLSRENQVDAAILRNQLQSEIWNTEV 127

Query: 133 ---WRYHTYPVNQMRGG--HSMIASFLINQHQITDVSDAKAYISRLNGVPKRLTQLQKAL 187
              W +     N + G   +S++A       +  D +       R+  +P  L Q ++ L
Sbjct: 128 LQSWAWDPQVYNGLAGSALYSLMAREFAPLPERLDSAT-----QRMEKIPSLLAQARENL 182

Query: 188 EVRAEKGIIAPKFVFGYVISDSQNILKGAPFDKNEDSALLADFRKKVKALSIPETEKAPL 247
           +         PK     V   ++ IL          S +       +  LS P+  +A  
Sbjct: 183 DPAR-----VPKIHAETVAKQNKGIL----------SIVDTFIAPNIGQLSPPDAARAQA 227

Query: 248 -IAEAEKALTSQVAPAYKALISYIKTLEAKADTRDGVWKLPDGDAFYNNALARTTTTDMT 306
            I   +KA+T Q     +  +  +    AK D R G  K       Y+  L     + ++
Sbjct: 228 AIDNLKKAVTEQ-----QTWLDTVLVPNAKGDFRVGADK-------YDQKLKFALLSSLS 275

Query: 307 ADEIHQLGLAEVERIHNEMRAIMKKV-----------------HFNGTLQAFFAFMRNNP 349
             EI Q   +E+ R+ +EM  I + V                      ++A       + 
Sbjct: 276 RAEIKQRAESELTRVRSEMYGIARTVLKDKPGAPALPDAPSDAQQQAAIEAALELAYADK 335

Query: 350 QFYYPNTPEGKAAYLADATQLIDNMHSRLDEVFKVKPKAAMIVKQVESFREKSAGKAFYE 409
                   + KAA LA +T+ +     R  ++  +      I+   E   ++    A+ +
Sbjct: 336 PARDKVVDDAKAA-LAQSTEFV-----RQKDLMTLPDSPVDIILMPEF--QRGVAVAYCD 387

Query: 410 QPAPDGSRPGSYYA-----NLYDMKAMPKYQME-------ALAYHEGIPGHHMQIAISQE 457
            P P      ++YA     + ++ K +  +  E        L+ HEG PGH+++   S +
Sbjct: 388 SPGPLDKNLKTFYAVSPIPDDWNAKQVDSFLREYNSRMIHLLSIHEGTPGHYLEGWHSGK 447

Query: 458 LKDIPKFRKFGGYTAYIEGWGLYSESFPKEMG-LYADPYSDFGRLAMELWRACRLVVDTG 516
                +     G  A  EGW +Y+E   +E G L  DP     +L   L      ++D G
Sbjct: 448 FPSTLRAVLRSGMFA--EGWAVYTERMMQEQGYLDNDPLFHLVQLKFYLRTIANAILDQG 505

Query: 517 IHAKKWTREQGIAYYVDNTPNAKSDAVKMVERHIVMPSQATAYKVGMIKLLELRHKAEKQ 576
           +H   W R++ +     +T   +S+A     R  +  +Q   Y VG+ + L+ R   + +
Sbjct: 506 VHVDGWDRDKAMHLMTHDTFQQESEASGKWVRAQLSSAQLPTYFVGVQEHLDTRKAVQDK 565

Query: 577 LGDKFDIRDFHTLILANGALPLDVLEE 603
           LG  F+++ +H  IL+ GA P+    E
Sbjct: 566 LGSTFNLKAYHDKILSYGAPPVRFARE 592