Pairwise Alignments

Query, 615 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 608 a.a., DUF885 family protein from Dyella japonica UNC79MFTsu3.2

 Score =  349 bits (895), Expect = e-100
 Identities = 207/596 (34%), Positives = 316/596 (53%), Gaps = 20/596 (3%)

Query: 18  LALPTSAVPSLNDSHNVASASVTAQSESEKANALFETIFMENIMASPIAQTYMGIKQDYD 77
           +A P +A P    +  VA+   T        NAL    +  N+  SP   T +G  +  +
Sbjct: 18  VAGPVAAAPPAAPAAGVAARVKTL-------NALLAEQWQHNLQNSPEFATILGDLRYNE 70

Query: 78  KWDEIGDEADALELARTQKQLAEINQLDASKLDPQTRLSLALLTQNLNNDIKDYQWRYHT 137
           +W ++     A E     + L     +D +    + +L+  L+ + L   +K Y  + + 
Sbjct: 71  RWSDVSLAHQAAERKVNAEFLKRFEAIDTTGFADEDKLNQQLMVRQLKEALKSYDLKLNE 130

Query: 138 YPVNQMRGGHSMIASFLINQHQITDVSDAKAYISRLNGVPKRLTQLQKALEVRAEKGIIA 197
            P++QM G H  +  F ++          + Y++RL+ VP+ L Q+ +      + G++ 
Sbjct: 131 MPLDQMNGMHLQLPGF-VSSIPFDSARQYEDYLARLHAVPRVLEQVSEVARQGLKDGMMP 189

Query: 198 PKFVFGYVISDSQNILKGAPFDKNEDSALLADFRKKVKALSIPETEKAPLIAEAEKALTS 257
           P+++   V+    +I + A  ++N  +  L  F K     SIP  E+  L      A+ +
Sbjct: 190 PRYLLEKVVGQIDSIARPAG-EENSFAEPLKHFPK-----SIPAAEQKRLHDAIVAAIDN 243

Query: 258 QVAPAYKALISYI-KTLEAKADTRDGVWKLPDGDAFYNNALARTTTTDMTADEIHQLGLA 316
           +V PAY+ L  ++ K       +  GVW+L +GDA Y   + + TTT  T   IH++GLA
Sbjct: 244 EVRPAYRKLGQFVAKDYAPHGRSEPGVWQLANGDAIYRFDVEQMTTTRETPQRIHEIGLA 303

Query: 317 EVERIHNEMRAIMKKVHFNGTLQAFFAFMRNNPQFYYPNTPEGKAAYLADATQLIDNMHS 376
           EV+RI +EM  I K   +   L +F   ++++ +      P  +   L      I  M  
Sbjct: 304 EVKRIEDEMTVIAKGQGYQD-LASFREALKHDAKL----NPTSREDILNRYRGFIAQMQP 358

Query: 377 RLDEVFKVKPKAAMIVKQVESFREKSAGKAFYEQPAPDGSRPGSYYANLYDMKAMPKYQM 436
            L ++F + P+  + V  VE++REK A  A Y Q  PDGSRPG  Y N  D        +
Sbjct: 359 ELPKLFGLLPRTKVQVMPVEAYREKEAPGAEYHQGTPDGSRPGQVYVNTGDYADRTTLTI 418

Query: 437 EALAYHEGIPGHHMQIAISQELKDIPKFRKFGGYTAYIEGWGLYSESFPKEMGLYADPYS 496
           E+ AYHE IPGHHMQI+I+Q L  +P FR+  GY AY+EGW LY+E   K++G Y DP S
Sbjct: 419 ESTAYHEAIPGHHMQISIAQALPGLPPFRQQAGYNAYVEGWALYAERLGKDIGFYKDPLS 478

Query: 497 DFGRLAMELWRACRLVVDTGIHAKKWTREQGIAYYVDNTPNAKSDAVKMVERHIVMPSQA 556
           D+GRL+ EL RA RLV+DTG+H K WTR+Q + ++  ++   + D     +R+I  P QA
Sbjct: 479 DYGRLSDELLRADRLVLDTGVHYKHWTRQQMVDFFHAHSSQDEPDIQAETDRYITWPGQA 538

Query: 557 TAYKVGMIKLLELRHKAEKQLGDKFDIRDFHTLILANGALPLDVLEEHVNQWIASV 612
             YK+G +K+LELR +A K+LG++FDIR FH  IL  GALPLDVLE   + WIA V
Sbjct: 539 LGYKMGQLKILELRERARKELGERFDIRAFHDRILGGGALPLDVLEARTDAWIADV 594