Pairwise Alignments

Query, 370 a.a., twitching motility protein PilU (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 347 a.a., pilus retraction protein PilT from Dechlorosoma suillum PS

 Score =  264 bits (675), Expect = 2e-75
 Identities = 138/335 (41%), Positives = 209/335 (62%)

Query: 1   MDVRPFLKVMVERKASDLFITAGFPPSAKIDGELRPLAESIFTPAQSLDFVESVMTEAQK 60
           MD+   L   V+ KASDL ++AG PP  ++ G++R +             V  +M + Q+
Sbjct: 1   MDITELLAFGVKNKASDLHLSAGLPPMIRVHGDVRRINLPAMEHKDVHAMVYDIMNDGQR 60

Query: 61  KEFHTTRECNFAFAVKELGRFRVSAFWQRESPGCVMRRIETKIPEVDDLKLPPILKDLVM 120
           K +    EC+F+F V  L RFRV+AF Q    G V R I +K+  ++DL  P I K++  
Sbjct: 61  KTYEENLECDFSFEVPNLARFRVNAFVQHRGAGAVFRTIPSKVLSLEDLNAPKIFKEISE 120

Query: 121 SKRGLIIMVGGTGTGKSTSLAALVGYRNSHARGHILTIEDPVEFVHDHRKSIITQREVGI 180
             RG++++ G TG+GKST+LAA+V + N +  GHILT+EDP+EFVH+ +K +I QREVG 
Sbjct: 121 FPRGIVLVTGPTGSGKSTTLAAMVNHINENDYGHILTVEDPIEFVHEAKKCLINQREVGP 180

Query: 181 DTESFDAALKSSLRQAPDVILIGEIRTQETMEFALSFAETGHLCMATLHANNANQALDRI 240
            T SF+ AL+S+LR+ PDVIL+GE+R  ET+  A++ AETGHL   TLH ++A + +DRI
Sbjct: 181 HTLSFNNALRSALREDPDVILVGEMRDLETIRLAMTAAETGHLVFGTLHTSSAAKTVDRI 240

Query: 241 MHLVPESKHQQLLFDLSLNLRGIVAQQLVPKVDGTGRRAAIEVLINTPRVASLIAKNELH 300
           + + P ++ + +   LS +LR +++Q L+   DG GR AA E++I TP + +LI + ++ 
Sbjct: 241 IDVFPAAEKEMIRAMLSESLRAVISQTLLKTKDGNGRVAAHEIMIGTPAIRNLIREAKIA 300

Query: 301 LLKETMAKSNEQGMQTFDQALLQLYVDGEISYADA 335
            +   +    + GMQT DQ L  L     IS A+A
Sbjct: 301 QMYSAIQTGQQFGMQTLDQNLTDLVRRNVISPAEA 335