Pairwise Alignments

Query, 374 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 340 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  259 bits (661), Expect = 1e-73
 Identities = 153/370 (41%), Positives = 210/370 (56%), Gaps = 34/370 (9%)

Query: 6   INASVEPVTANEAESTPDVTLGSVLKSAREQMGLSIAQTAVKLHLRPGIVENLEADDFSN 65
           +N  + P ++ E E+    +LG +LK+ARE  G+S+A  A  LHLRP +V++LEADDFSN
Sbjct: 1   MNEELTP-SSEEQEAPATESLGQILKAAREAKGMSVADVATALHLRPSVVKDLEADDFSN 59

Query: 66  IASSTYVRGYVKNYARMLGVDNALIEACLARQVPFVTQPPMQSFSRKTTYQARDTKLKWL 125
           I+S+TY+RGY+KN+AR++  D   +EACLA QVP V+QP MQSFSRKT  QARD +   L
Sbjct: 60  ISSATYIRGYIKNFARIVEADKQKVEACLASQVPGVSQPAMQSFSRKTVRQARDKRYLML 119

Query: 126 SFFIVIVLLGLFVVWWMQRATL--VTHVDISKPTAEEVAAANQTLPGDVLLTETDASARL 183
           ++ ++++L+ L V WW+Q +       VD SKPTAEEVAAA QT   D L+         
Sbjct: 120 TYLVILILVALLVFWWLQTSKFFNTAAVDFSKPTAEEVAAAGQTSIQDDLMQRLGNETH- 178

Query: 184 SEIAVNGSMATDGPVKDTDVSSIDPNTNVMTAMEGEQTANSSNESSRNSVAKPNQTVTAS 243
                  + A   P  DT+ +              EQ+ NS +      VA    TV   
Sbjct: 179 -------TQAGTSPQPDTEAAY-------------EQSVNSDD----MPVAAQEVTV--- 211

Query: 244 GAVQTPSTTATVTVPVQNTASAQTQVTANASATNVTSPTTNAQTMPAVAGQSTLNIQLTG 303
           G+ + PS        V  TAS   ++   AS    T   T   ++PA  GQS L +  + 
Sbjct: 212 GSAEEPSAQQDNNSAVDTTASDMREIDTRASNAEATPEVT--ASIPATPGQSALVMSFSA 269

Query: 304 DCWINIVDANGKAIVDGVRGAGANIQASGVLPFKVILGAPTVVSSFTVDGKAISLAEFPK 363
           DCW+ + DA GK +V  +R AG  I  SG  PF  ILGAP  V   +++G+A SL EFPK
Sbjct: 270 DCWVQVKDATGKVLVSDLRKAGQTINLSGKAPFSFILGAPQAV-KLSINGEAASLDEFPK 328

Query: 364 GRVARLTIPQ 373
           GRVAR ++P+
Sbjct: 329 GRVARFSLPK 338