Pairwise Alignments

Query, 374 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 362 a.a., XRE family transcriptional regulator from Burkholderia phytofirmans PsJN

 Score = 92.4 bits (228), Expect = 2e-23
 Identities = 95/378 (25%), Positives = 155/378 (41%), Gaps = 53/378 (14%)

Query: 8   ASVEPVTANEAESTPDVTLGSVLKSAREQMGLSIAQTAVKLHLRPGIVENLEADDFSNIA 67
           A+V+PV     +S   V  G+ L   RE  G +I   + +L +    +  LE+ D S++ 
Sbjct: 25  AAVQPVVQPAMDSLAAV--GARLTQLRESKGWTIDDVSARLKVSVIKLRALESGDISHLP 82

Query: 68  SSTYVRGYVKNYARMLGVDNALIEACLARQ----VPFVTQP-------PMQSFSRKTTYQ 116
            +T+  G V++YA+MLG D     A L R+     P ++ P       P    S      
Sbjct: 83  DTTFALGVVRSYAKMLGADPTPFTAALRREKGVPAPDLSMPASSGRDLPRGKVSLSLGGS 142

Query: 117 ARDTKLKWLSFFIVIVLLGLFVVWWMQRATLVTHVDISKPTAEEVAAANQTLPGDVLLTE 176
            + ++  WL     +++  + +  W          D S   A   A+AN    G      
Sbjct: 143 GQKSR-SWLWGVAAVIVAVIALGMWHTNGG-----DSSAWLARLKASANGAAGGS----- 191

Query: 177 TDASARLSEIAVNGSMATDGPVKDTDVSSIDPNTNVMTAMEGEQTANSSNESSRNSVAKP 236
           T AS  +++    GS AT                      E   +A  +  +   + A P
Sbjct: 192 TGASGAVAQGQSAGSEAT---------------------AEEAASATDTQAAENAASATP 230

Query: 237 NQTVTASGAVQTPSTTATVTVPVQNTASAQTQVTANASATNVTSPTTNAQTMPAVAGQST 296
                A+GA  + +   T       T S   Q  A A+A   ++P   A T+   AGQS 
Sbjct: 231 MPAPLATGAAPSSAPAVTAMTAAPKTGS---QAPALATAPGASAP---AATVTPAAGQSI 284

Query: 297 LNIQLTGDCWINIVDANGKAIVDGVRGAGANIQASGVLPFKVILGAPTVVSSFTVDGKAI 356
           + + +  D W ++   +GK +  G+  AG     +G  PFKV LG    + S T+DG+ +
Sbjct: 285 VALSVKQDSWFSVRGKDGKEVFSGLVHAGDTKTVTGEAPFKVTLGNRAGLDSLTLDGQPV 344

Query: 357 SLAEF--PKGRVARLTIP 372
             +++   KG VAR  +P
Sbjct: 345 DPSKYAAAKGNVARFALP 362