Pairwise Alignments

Query, 374 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 375 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  560 bits (1444), Expect = e-164
 Identities = 299/380 (78%), Positives = 320/380 (84%), Gaps = 13/380 (3%)

Query: 1   MKDNEINASVEPVTANEAESTPDVTLGSVLKSAREQMGLSIAQTAVKLHLRPGIVENLEA 60
           MKDNEINASVEPV A+EAESTPDVTLG+VL++AREQMGLSIA TAVKLHLRPGIVENLEA
Sbjct: 1   MKDNEINASVEPVAASEAESTPDVTLGTVLRTAREQMGLSIADTAVKLHLRPGIVENLEA 60

Query: 61  DDFSNIASSTYVRGYVKNYARMLGVDNALIEACLARQVPFVTQPPMQSFSRKTTYQARDT 120
           DDFSNI+SSTYVRGYVKNYARMLGVDNALIEACLARQVP VTQP MQSFSRKTTYQARDT
Sbjct: 61  DDFSNISSSTYVRGYVKNYARMLGVDNALIEACLARQVPLVTQPAMQSFSRKTTYQARDT 120

Query: 121 KLKWLSFFIVIVLLGLFVVWWMQRATLVTHVDISKPTAEEVAAANQTLPGDVLLTETDAS 180
           KLKWLSFFIVIVLLGLFV+WWMQR TLVTHVD+S+PTAEE+AAANQTLPGDVLLTETDAS
Sbjct: 121 KLKWLSFFIVIVLLGLFVLWWMQRTTLVTHVDVSQPTAEELAAANQTLPGDVLLTETDAS 180

Query: 181 ARLSEIAVNGSMATDGPVKDTDVSSIDPNTNVMTAMEGEQT-ANS------SNESSRNSV 233
            RLSEIAVNGSMATDGP+KDTD S+IDPN N   AME EQT ANS      SN +  N+ 
Sbjct: 181 ERLSEIAVNGSMATDGPIKDTDESTIDPNMNDTAAMEVEQTPANSAVNPSGSNNALTNNA 240

Query: 234 AKPNQTVTASGAVQTPSTTATVTVPVQNTASAQTQVTANASATNVTSPTTNAQTMPAVAG 293
           +    +  AS AV  P+ T        NTA  Q    +NA ATN  S    AQ MP  AG
Sbjct: 241 SNTAPSSAASNAVAIPNVTQNAAT---NTAPEQNPSASNAPATNTAS---TAQAMPVAAG 294

Query: 294 QSTLNIQLTGDCWINIVDANGKAIVDGVRGAGANIQASGVLPFKVILGAPTVVSSFTVDG 353
           QS++ I+LTGDCWINIVDA GKAIVDGVRGAGANIQASGV PFKVILGAPTVVS+FTVDG
Sbjct: 295 QSSITIELTGDCWINIVDAKGKAIVDGVRGAGANIQASGVPPFKVILGAPTVVSTFTVDG 354

Query: 354 KAISLAEFPKGRVARLTIPQ 373
           KAISLAEFPKGRVARLTIPQ
Sbjct: 355 KAISLAEFPKGRVARLTIPQ 374