Pairwise Alignments

Query, 371 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 370 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase from Pseudomonas stutzeri RCH2

 Score =  518 bits (1335), Expect = e-152
 Identities = 261/359 (72%), Positives = 309/359 (86%), Gaps = 1/359 (0%)

Query: 1   MYNETPIKRRPSTRIYVGNVPIGDGAPIAVQSMTNTKTTDVEATVAQIRALEKVGADIVR 60
           M++E+PIKRR S +I+VG+VP+G  API+VQSMTNT+T DVEATVAQI+ L   GADIVR
Sbjct: 1   MHSESPIKRRQSRKIWVGSVPVGGDAPISVQSMTNTETCDVEATVAQIQRLANAGADIVR 60

Query: 61  VSVPTMDAAEAFKLIKQSVSVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRS 120
           VSVP+M+AAEAF  IK+ V +PLVADIHFDY+IAL+VAE GVDCLRINPGNIG E+R+R+
Sbjct: 61  VSVPSMEAAEAFGRIKRLVQLPLVADIHFDYQIALRVAELGVDCLRINPGNIGREDRVRA 120

Query: 121 VVECARDKNIPIRIGVNGGSLEKDLMDKYKEPTPEALLESAMRHVDILDRLNFDQFKVSV 180
           VV+ ARDK IPIRIGVN GSLEKDL  KY EPTP+AL+ESA+RHVD LDRL+F  FKVSV
Sbjct: 121 VVDAARDKGIPIRIGVNAGSLEKDLQKKYGEPTPQALVESALRHVDHLDRLDFQDFKVSV 180

Query: 181 KASDVFLAVESYRLLAKQIRQPLHLGITEAGGARAGAVKSAVGLGMLLAEGIGDTLRISL 240
           KASDVF+AVE+YRLLA QI QPLHLGITEAGG R+G VKSAVGLGMLLA+GIGDT+R+SL
Sbjct: 181 KASDVFMAVEAYRLLAGQIEQPLHLGITEAGGLRSGTVKSAVGLGMLLADGIGDTIRVSL 240

Query: 241 AADPVEEIKVGFDILKSLRIRSRGINFIACPSCSRQEFDVISTVNELERRLEDVTTAMDV 300
           AADPVEEIKVGFDILKSLR+RSRGINFIACPSCSRQ FDV+ T+NELE R+ED+   MDV
Sbjct: 241 AADPVEEIKVGFDILKSLRLRSRGINFIACPSCSRQNFDVVKTMNELEARVEDLLVPMDV 300

Query: 301 SIIGCVVNGPGEALVSHIGLTGGHRKSGYYDEGERQKERFDNDNLVDSLEAKIRAKASQ 359
           ++IGCVVNGPGEA  +H+GLTGG   +  Y +G +  ++ +N+NLVD LE  IR KA++
Sbjct: 301 AVIGCVVNGPGEAKEAHVGLTGGSPNNLVYIDG-KPAQKLNNENLVDELEQLIRRKAAE 358