Pairwise Alignments

Query, 371 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 376 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

 Score =  623 bits (1607), Expect = 0.0
 Identities = 321/369 (86%), Positives = 345/369 (93%), Gaps = 2/369 (0%)

Query: 1   MYNETPIKRRPSTRIYVGNVPIGDGAPIAVQSMTNTKTTDVEATVAQIRALEKVGADIVR 60
           M +E+PIKRRPSTRIYVG+VPIGDGAPIAVQSMTNT+TTDV ATVAQI++LEKVGADIVR
Sbjct: 3   MQHESPIKRRPSTRIYVGDVPIGDGAPIAVQSMTNTRTTDVAATVAQIKSLEKVGADIVR 62

Query: 61  VSVPTMDAAEAFKLIKQSVSVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRS 120
           VSVPTM+AAEAFKLIKQ VSVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNE RIRS
Sbjct: 63  VSVPTMEAAEAFKLIKQQVSVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEARIRS 122

Query: 121 VVECARDKNIPIRIGVNGGSLEKDLMDKYKEPTPEALLESAMRHVDILDRLNFDQFKVSV 180
           VV+CARDK IPIRIGVNGGSLEKDL  KY EPTPEAL+ESAMRHVDILDRLNFDQFKVSV
Sbjct: 123 VVDCARDKGIPIRIGVNGGSLEKDLQLKYGEPTPEALVESAMRHVDILDRLNFDQFKVSV 182

Query: 181 KASDVFLAVESYRLLAKQIRQPLHLGITEAGGARAGAVKSAVGLGMLLAEGIGDTLRISL 240
           KASDVFLAV+SYRLLAK+I QPLHLGITEAGGARAG+VKSAVGLGMLLAEGIGDTLRISL
Sbjct: 183 KASDVFLAVDSYRLLAKKIDQPLHLGITEAGGARAGSVKSAVGLGMLLAEGIGDTLRISL 242

Query: 241 AADPVEEIKVGFDILKSLRIRSRGINFIACPSCSRQEFDVISTVNELERRLEDVTTAMDV 300
           AADPVEEIKVGFDILKSLRIRSRGINFIACPSCSRQEFDVI TVN LE+RLEDV T MDV
Sbjct: 243 AADPVEEIKVGFDILKSLRIRSRGINFIACPSCSRQEFDVIGTVNALEQRLEDVLTPMDV 302

Query: 301 SIIGCVVNGPGEALVSHIGLTGGHRKSGYYDEGERQKERFDNDNLVDSLEAKIRAKASQM 360
           SIIGCVVNGPGEA VSH+GL G ++KS +Y++G RQKERFDND+LV  LEAKIRAKA+++
Sbjct: 303 SIIGCVVNGPGEAEVSHLGLAGSNKKSAFYEDGVRQKERFDNDDLVAQLEAKIRAKAARL 362

Query: 361 --ANRIQVK 367
              NRI +K
Sbjct: 363 DEKNRIDIK 371