Pairwise Alignments

Query, 371 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 369 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase from Pseudomonas syringae pv. syringae B728a

 Score =  513 bits (1320), Expect = e-150
 Identities = 265/361 (73%), Positives = 300/361 (83%), Gaps = 2/361 (0%)

Query: 1   MYNETPIKRRPSTRIYVGNVPIGDGAPIAVQSMTNTKTTDVEATVAQIRALEKVGADIVR 60
           M+ E+PIKRR S +I+VG+VP+G  APIAVQSMTN+ T DV ATVAQI  LE  G DIVR
Sbjct: 1   MHGESPIKRRESRKIWVGSVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVR 60

Query: 61  VSVPTMDAAEAFKLIKQSVSVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRS 120
           VSVP MDAAEAF  IKQ V VPLVADIHFD+RIAL+VAE GVDCLRINPGNIG E+R+R+
Sbjct: 61  VSVPDMDAAEAFGRIKQLVKVPLVADIHFDHRIALRVAELGVDCLRINPGNIGREDRVRA 120

Query: 121 VVECARDKNIPIRIGVNGGSLEKDLMDKYKEPTPEALLESAMRHVDILDRLNFDQFKVSV 180
           VV+ ARD+ IPIRIGVN GSLEKDL  KY EPTPEAL+ESA+RHV+ L RLNF  FKVSV
Sbjct: 121 VVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPEALVESALRHVEHLQRLNFQDFKVSV 180

Query: 181 KASDVFLAVESYRLLAKQIRQPLHLGITEAGGARAGAVKSAVGLGMLLAEGIGDTLRISL 240
           KASDVF+AV +YRLLAK+I QPLHLGITEAGG R+G VKSAVGLGMLLAEGIGDT+RISL
Sbjct: 181 KASDVFMAVAAYRLLAKEIVQPLHLGITEAGGLRSGTVKSAVGLGMLLAEGIGDTIRISL 240

Query: 241 AADPVEEIKVGFDILKSLRIRSRGINFIACPSCSRQEFDVISTVNELERRLEDVTTAMDV 300
           AADPVEE+KVG+DILKSLR+RSRGINFIACPSCSRQ FDV+ T+NELE RLED+   +DV
Sbjct: 241 AADPVEEVKVGYDILKSLRLRSRGINFIACPSCSRQNFDVVKTMNELEGRLEDLLVPLDV 300

Query: 301 SIIGCVVNGPGEALVSHIGLTGGHRKSGYYDEGERQKERFDNDNLVDSLEAKIRAKASQM 360
           ++IGCVVNGPGEA  +HIGLTGG     Y D    QK    NDNLV+ LE  IR KA++ 
Sbjct: 301 AVIGCVVNGPGEAKEAHIGLTGGTPNLIYIDGKPAQK--LTNDNLVNELERLIREKAAEK 358

Query: 361 A 361
           A
Sbjct: 359 A 359