Pairwise Alignments

Query, 371 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 372 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (RefSeq) from Shewanella amazonensis SB2B

 Score =  678 bits (1750), Expect = 0.0
 Identities = 345/368 (93%), Positives = 358/368 (97%)

Query: 1   MYNETPIKRRPSTRIYVGNVPIGDGAPIAVQSMTNTKTTDVEATVAQIRALEKVGADIVR 60
           M+NE PIKRRPSTRIYVGNVPIGDGAPIAVQSMTNT+TTDV ATVAQIRALE VGADIVR
Sbjct: 1   MFNENPIKRRPSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVAATVAQIRALENVGADIVR 60

Query: 61  VSVPTMDAAEAFKLIKQSVSVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRS 120
           VSVPTMDAAEAF+ IKQ V VPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIR+
Sbjct: 61  VSVPTMDAAEAFRQIKQQVKVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRA 120

Query: 121 VVECARDKNIPIRIGVNGGSLEKDLMDKYKEPTPEALLESAMRHVDILDRLNFDQFKVSV 180
           VV+CARDKNIPIRIGVNGGSLEKDLMDKYKEPTPEALLESAMRHVDILDRLNFDQFKVSV
Sbjct: 121 VVDCARDKNIPIRIGVNGGSLEKDLMDKYKEPTPEALLESAMRHVDILDRLNFDQFKVSV 180

Query: 181 KASDVFLAVESYRLLAKQIRQPLHLGITEAGGARAGAVKSAVGLGMLLAEGIGDTLRISL 240
           KASDVFLAVESYRLLAKQI+QPLHLGITEAGGARAGAVKSAVGLGMLLAEGIGDTLRISL
Sbjct: 181 KASDVFLAVESYRLLAKQIKQPLHLGITEAGGARAGAVKSAVGLGMLLAEGIGDTLRISL 240

Query: 241 AADPVEEIKVGFDILKSLRIRSRGINFIACPSCSRQEFDVISTVNELERRLEDVTTAMDV 300
           AADPVEE+KVGFDILKSLRIRSRGINFIACPSCSRQEFDVISTVNELERRLEDVTTAMDV
Sbjct: 241 AADPVEEVKVGFDILKSLRIRSRGINFIACPSCSRQEFDVISTVNELERRLEDVTTAMDV 300

Query: 301 SIIGCVVNGPGEALVSHIGLTGGHRKSGYYDEGERQKERFDNDNLVDSLEAKIRAKASQM 360
           SIIGCVVNGPGEALVSH+GL GGH+KSGYYD+G RQKERFDNDNLVD+LEAKIRAKAS M
Sbjct: 301 SIIGCVVNGPGEALVSHLGLAGGHKKSGYYDDGIRQKERFDNDNLVDALEAKIRAKASLM 360

Query: 361 ANRIQVKD 368
           ANRI V++
Sbjct: 361 ANRIPVQE 368