Pairwise Alignments

Query, 371 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 371 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (RefSeq) from Shewanella loihica PV-4

 Score =  662 bits (1708), Expect = 0.0
 Identities = 339/371 (91%), Positives = 353/371 (95%)

Query: 1   MYNETPIKRRPSTRIYVGNVPIGDGAPIAVQSMTNTKTTDVEATVAQIRALEKVGADIVR 60
           MYNE+PI RRPSTRIYVG+VPIGDGAPIAVQSMTNT+TTDVEATVAQIRALE VGADIVR
Sbjct: 1   MYNESPIIRRPSTRIYVGDVPIGDGAPIAVQSMTNTRTTDVEATVAQIRALENVGADIVR 60

Query: 61  VSVPTMDAAEAFKLIKQSVSVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRS 120
           VSVPTMDAAEAFK+IKQ   VPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRS
Sbjct: 61  VSVPTMDAAEAFKVIKQQTKVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRS 120

Query: 121 VVECARDKNIPIRIGVNGGSLEKDLMDKYKEPTPEALLESAMRHVDILDRLNFDQFKVSV 180
           VVECARDKNIPIRIGVNGGSLEKDLMDKYKEPTP+ALLESAMRHVDILDRLNFDQFKVSV
Sbjct: 121 VVECARDKNIPIRIGVNGGSLEKDLMDKYKEPTPQALLESAMRHVDILDRLNFDQFKVSV 180

Query: 181 KASDVFLAVESYRLLAKQIRQPLHLGITEAGGARAGAVKSAVGLGMLLAEGIGDTLRISL 240
           KASDVFLAVESYRLLAKQI+QPLHLGITEAGGARAGAVKSAVGLGMLLAEGIGDTLRISL
Sbjct: 181 KASDVFLAVESYRLLAKQIKQPLHLGITEAGGARAGAVKSAVGLGMLLAEGIGDTLRISL 240

Query: 241 AADPVEEIKVGFDILKSLRIRSRGINFIACPSCSRQEFDVISTVNELERRLEDVTTAMDV 300
           AADPVEEIKVGFDILKSLRIRSRGINFIACPSCSRQEFDVI+TVNELERRLEDV T MDV
Sbjct: 241 AADPVEEIKVGFDILKSLRIRSRGINFIACPSCSRQEFDVIATVNELERRLEDVVTPMDV 300

Query: 301 SIIGCVVNGPGEALVSHIGLTGGHRKSGYYDEGERQKERFDNDNLVDSLEAKIRAKASQM 360
           SIIGCVVNGPGEALVS IGLTGG+RKSGYYD+G RQKERFDN+++VD LEAKIRAK + +
Sbjct: 301 SIIGCVVNGPGEALVSDIGLTGGNRKSGYYDDGVRQKERFDNEHIVDQLEAKIRAKVASV 360

Query: 361 ANRIQVKDTTE 371
             RI   D TE
Sbjct: 361 DARIPTTDITE 371