Pairwise Alignments

Query, 371 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 363 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  343 bits (881), Expect = 3e-99
 Identities = 175/328 (53%), Positives = 232/328 (70%)

Query: 7   IKRRPSTRIYVGNVPIGDGAPIAVQSMTNTKTTDVEATVAQIRALEKVGADIVRVSVPTM 66
           I+R+ +  + +G V IG   P+ VQSMTNT T DVE TV QIR L++ G +IVR++V   
Sbjct: 3   IQRKQTREVRIGKVRIGGANPVVVQSMTNTDTRDVEQTVEQIRQLQEAGCEIVRLAVLNE 62

Query: 67  DAAEAFKLIKQSVSVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRSVVECAR 126
           DAA A K I+  VSVPLVADIHFD+R+A+   E GVD LRINPGNIG    +  VV+ A+
Sbjct: 63  DAAWAIKPIRSQVSVPLVADIHFDHRLAVSALEAGVDALRINPGNIGTRAAVDRVVDAAK 122

Query: 127 DKNIPIRIGVNGGSLEKDLMDKYKEPTPEALLESAMRHVDILDRLNFDQFKVSVKASDVF 186
             N  IRIGVN GSLE DL+D+Y  PTPEA++ESA RH+ +L+  NF   KVS+K+S V 
Sbjct: 123 AHNAVIRIGVNSGSLETDLIDQYGGPTPEAMVESAFRHIRMLEDRNFGDIKVSLKSSSVS 182

Query: 187 LAVESYRLLAKQIRQPLHLGITEAGGARAGAVKSAVGLGMLLAEGIGDTLRISLAADPVE 246
             +E+Y LL+ +   PLH+G+TEAG    G++KSAVGLG+LL +GIGDTLR+SL +DPV 
Sbjct: 183 RCIEAYTLLSAKCDYPLHIGVTEAGTVLRGSIKSAVGLGVLLWQGIGDTLRVSLTSDPVA 242

Query: 247 EIKVGFDILKSLRIRSRGINFIACPSCSRQEFDVISTVNELERRLEDVTTAMDVSIIGCV 306
           E+ V ++IL+SL +RSRG   IACP+C R E  +I+   E+ERRLE  T +  V+++GCV
Sbjct: 243 EMAVAWEILRSLGLRSRGPEIIACPTCGRCEIGLIALAEEVERRLEGETESFKVAVMGCV 302

Query: 307 VNGPGEALVSHIGLTGGHRKSGYYDEGE 334
           VNGPGEA  + +G+ GG  K   + +GE
Sbjct: 303 VNGPGEAREADLGIAGGRDKGIIFRKGE 330