Pairwise Alignments

Query, 371 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 383 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  408 bits (1049), Expect = e-118
 Identities = 202/354 (57%), Positives = 264/354 (74%)

Query: 7   IKRRPSTRIYVGNVPIGDGAPIAVQSMTNTKTTDVEATVAQIRALEKVGADIVRVSVPTM 66
           I RR S +I+VG VPIG  APIAVQ+MTNT TTD+  T+AQ++A    GADIVRVSVP +
Sbjct: 12  IYRRKSRQIHVGPVPIGGDAPIAVQTMTNTLTTDIPGTIAQVQAAADAGADIVRVSVPDV 71

Query: 67  DAAEAFKLIKQSVSVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRSVVECAR 126
           D++ A K I +   VP+VADIHF Y+  ++ AE G  CLRINPGNIG+E+R++ V++ AR
Sbjct: 72  DSSRALKEIVRESPVPIVADIHFHYKRGIEAAEAGAACLRINPGNIGDEKRVKEVIKAAR 131

Query: 127 DKNIPIRIGVNGGSLEKDLMDKYKEPTPEALLESAMRHVDILDRLNFDQFKVSVKASDVF 186
           D N  +RIGVN GSLEK L+DKY EP PEA++ESA+ H+ IL   +F +FK+S KASDVF
Sbjct: 132 DNNCSMRIGVNAGSLEKHLLDKYAEPCPEAMVESALDHIKILQDNDFHEFKISCKASDVF 191

Query: 187 LAVESYRLLAKQIRQPLHLGITEAGGARAGAVKSAVGLGMLLAEGIGDTLRISLAADPVE 246
           L+  +Y+ LA     PLHLGITEAGG  +G +KSA+GLG LL  GIGDT+R+SL+ADPVE
Sbjct: 192 LSAAAYQALADATDAPLHLGITEAGGLMSGTIKSAIGLGNLLWMGIGDTIRVSLSADPVE 251

Query: 247 EIKVGFDILKSLRIRSRGINFIACPSCSRQEFDVISTVNELERRLEDVTTAMDVSIIGCV 306
           EIKVG+DILKSL +R RG+N I+CPSC+RQ FDVI TV  LE+RLE + T M +SIIGCV
Sbjct: 252 EIKVGYDILKSLGLRHRGVNVISCPSCARQGFDVIKTVEALEQRLEHIKTPMSLSIIGCV 311

Query: 307 VNGPGEALVSHIGLTGGHRKSGYYDEGERQKERFDNDNLVDSLEAKIRAKASQM 360
           VNGPGEAL++ +G TGG   SG      +Q  +  N+ ++D +  ++  +A+++
Sbjct: 312 VNGPGEALMTDVGFTGGGAGSGMVYLAGKQSHKMSNEQMIDHIVEQVEKRAAEL 365