Pairwise Alignments

Query, 395 a.a., PQQ enzyme repeat domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 455 a.a., Pyrrolo-quinoline quinone (NCBI) from Rhodospirillum rubrum S1H

 Score =  132 bits (333), Expect = 2e-35
 Identities = 94/354 (26%), Positives = 159/354 (44%), Gaps = 17/354 (4%)

Query: 47  WSASVGDGVGDYYSRLT--PAVRYGKIFAADRYGAVMAFDEASGEQVWRKDFSEEFRDNA 104
           WS S+G G G    RL   P +  G+IF  DR   V AF+  +G+++W+        D  
Sbjct: 104 WSTSIGAG-GTSRDRLLNGPVLADGRIFTIDREATVRAFNAETGKELWQAALPNRDDD-- 160

Query: 105 LAKNKGARLAAGITAARNKLFIGGESGLLAALNAEDGQVLWHVIAGGELLSKPTVADDVV 164
             ++ GA L  G+   R ++F       + AL A+ GQ LW     G + + P V    V
Sbjct: 161 --EDDGAFLGGGLAYDRGRIFASTGFAKVVALRADTGQELWRTEVDGPIRAAPAVNSGRV 218

Query: 165 VVSTSSGSLEAYNVDTGAKLWVYDMQLPNLTLRGTGSAAYEAGGFFIGTADGKVAVVVKN 224
           VV T      A +   G KLW +       T+ G  + A + G   I  + G++  +   
Sbjct: 219 VVLTVDNQAFALSAVDGHKLWSHSGSPQTATILGAPTPAIDQGVVVIPYSSGELFALRLE 278

Query: 225 NGQAAWEQAIYNPTGGNEFTRMADVDMTPLILGDNLYAVSYNGNLVSMELRTGRIIWTRK 284
           +G   W  A+      +    + D+   P++  ++LY +  +G +V M+LR+G   W  +
Sbjct: 279 SGTEIWSDAVTAVRRTDATGSLQDIRANPVVDANHLYVIGNSGLMVGMDLRSGARAWQLR 338

Query: 285 YSSFNELTTAGLSLFLVDDHSRIYSVDRRNGLELW--------SNSELVNRTL-TSPEVY 335
            +   +   AG  LFL+   + + +V+ + G  +W        S   L    L T P + 
Sbjct: 339 VAGTQQPWLAGDVLFLISAEAELAAVNAKTGAVIWTTPLPRYESPDSLATPLLWTGPVLA 398

Query: 336 KDYLVVGDFEGYLHFIDRSTGSIVGRIQVDSSGLFSQPIVVDDKIYVQGRSGKL 389
            D L++G  +   + +   TG I+GRI++  + + S PIV    +Y    +G+L
Sbjct: 399 SDRLIIGSSDASAYAVSPYTGKILGRIELPDA-MASAPIVAKGTLYFLTTTGEL 451