Pairwise Alignments

Query, 395 a.a., PQQ enzyme repeat domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 390 a.a., pyrrolo-quinoline quinone from Marinobacter adhaerens HP15

 Score =  215 bits (547), Expect = 2e-60
 Identities = 129/378 (34%), Positives = 189/378 (50%), Gaps = 15/378 (3%)

Query: 15  LAMLSACSSSDVEEEPVSELTAIQATVFPEVSWSASVGDGVGDYYSRLTPAVRYGKIFAA 74
           LA LS CSS+D  E+PV  +  I+A+V  E  WS SVGDG    +  L P V    I+AA
Sbjct: 20  LAALSGCSSTDTFEQPVP-VPEIEASVEFERVWSMSVGDGHDGDFLYLAPLVTGDLIYAA 78

Query: 75  DRYGAVMAFDEASGEQVWRKDFSEEFRDNALAKNKGARLAAGITAARNKLFIGGESGLLA 134
              G + A    +GE  W  +F +             R+ +G+      L++  E+  L 
Sbjct: 79  SADGELYAVATETGEVAWESEFED-------------RIFSGLGGDGQNLYLTTENADLV 125

Query: 135 ALNAEDGQVLWHVIAGGELLSKPTVADDVVVVSTSSGSLEAYNVDTGAKLWVYDMQLPNL 194
           AL+ EDG  +W      E+LS P     +VV  T+ G +  ++   G KLW YD  +P L
Sbjct: 126 ALSREDGSEVWRTSLPTEVLSSPQSNGSLVVAQTTDGKVLGFSATDGEKLWQYDGSVPVL 185

Query: 195 TLRGTGSAAYEAGGFFIGTADGKVAVVVKNNGQAAWEQAIYNPTGGNEFTRMADVDMTPL 254
           ++R   +            A GK+  +   +GQ  W+  +  P G  E  R+ DV   PL
Sbjct: 186 SMRAAAAPLVGGDVVIASFASGKLIALTAASGQPMWQYEVGQPQGRTELERLVDVTGQPL 245

Query: 255 ILGDNLYAVSYNGNLVSMELRTGRIIWTRKYSSFNELTTAGLSLFLVDDHSRIYSVDRRN 314
           ++   +  V Y G L  +++RTG+ IW+RK SS       G  ++L      I ++   +
Sbjct: 246 VIETAVMVVGYQGKLALVDIRTGQEIWSRKASSLYSPMIGGGQIYLAAADGEIIALRGSD 305

Query: 315 GLELWSNSELVNRTLTSPEVYKDYLVVGDFEGYLHFIDRSTGSIVGRIQVDSSGL-FSQP 373
             E+W+   L  R LT P VY+DYLVVGDFEGYLH +DR  GS+VG+ + D  G+     
Sbjct: 306 RREVWTQDRLAWRQLTQPMVYEDYLVVGDFEGYLHALDREDGSLVGQREFDDEGIRVPAQ 365

Query: 374 IVVDDKIYVQGRSGKLAV 391
            + +  + V G SGK+AV
Sbjct: 366 RLANGNLLVFGNSGKMAV 383



 Score = 49.3 bits (116), Expect = 2e-10
 Identities = 43/200 (21%), Positives = 79/200 (39%), Gaps = 56/200 (28%)

Query: 251 MTPLILGDNLYAVSYNGNLVSMELRTGRIIWTRKYSS--FNELTTAGLSLFLVDDHSRIY 308
           + PL+ GD +YA S +G L ++   TG + W  ++    F+ L   G +L+L  +++ + 
Sbjct: 66  LAPLVTGDLIYAASADGELYAVATETGEVAWESEFEDRIFSGLGGDGQNLYLTTENADLV 125

Query: 309 SVDRRNGLELW-------------SNSELV------------------------------ 325
           ++ R +G E+W             SN  LV                              
Sbjct: 126 ALSREDGSEVWRTSLPTEVLSSPQSNGSLVVAQTTDGKVLGFSATDGEKLWQYDGSVPVL 185

Query: 326 -NRTLTSPEVYKDYLVVGDFEGYLHFIDRSTGSIVGRIQVDSS----------GLFSQPI 374
             R   +P V  D ++     G L  +  ++G  + + +V              +  QP+
Sbjct: 186 SMRAAAAPLVGGDVVIASFASGKLIALTAASGQPMWQYEVGQPQGRTELERLVDVTGQPL 245

Query: 375 VVDDKIYVQGRSGKLAVVTL 394
           V++  + V G  GKLA+V +
Sbjct: 246 VIETAVMVVGYQGKLALVDI 265