Pairwise Alignments

Query, 395 a.a., PQQ enzyme repeat domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 393 a.a., outer membrane protein assembly factor BamB from Pantoea sp. MT58

 Score =  310 bits (793), Expect = 6e-89
 Identities = 151/390 (38%), Positives = 241/390 (61%), Gaps = 4/390 (1%)

Query: 6   KNLLAAGLSLAMLSACSSSDVEEEPV--SELTAIQATVFPEVSWSASVGDGVGDYYSRLT 63
           K LL   +S+ +LS CS    EE+ V  + L  ++    P+  WS SVGDGVGD+YS L 
Sbjct: 5   KYLLPGLISVTLLSGCSLFSGEEDVVKMAPLPKVENQFTPQKVWSTSVGDGVGDFYSNLH 64

Query: 64  PAVRYGKIFAADRYGAVMAFDEASGEQVWRKDFSEEFRDNALAKNKGARLAAGITAARNK 123
           PA +   ++AADR+G V A D A G++ W+ D SE  +    +KN  A L+ G+TA  ++
Sbjct: 65  PAWQDNTVYAADRFGIVKALDAADGKEKWKVDLSE--KTGFFSKNISALLSGGLTADGDR 122

Query: 124 LFIGGESGLLAALNAEDGQVLWHVIAGGELLSKPTVADDVVVVSTSSGSLEAYNVDTGAK 183
           +++G E G + ALN+ DG V W     GE LS+P V+D +V++ TS+G L+  +  +G  
Sbjct: 123 IYVGSERGQVFALNSSDGSVAWQTKVAGEALSRPVVSDGLVLIHTSNGMLQGLDQSSGVV 182

Query: 184 LWVYDMQLPNLTLRGTGSAAYEAGGFFIGTADGKVAVVVKNNGQAAWEQAIYNPTGGNEF 243
            W  ++ +P L+LRG  + A   GG  +G  +G+V+ V  N GQ  W+Q I   +G  E 
Sbjct: 183 KWSVNLDMPALSLRGESAPAVAFGGAIVGGDNGRVSAVAMNQGQLIWQQRISQVSGATEI 242

Query: 244 TRMADVDMTPLILGDNLYAVSYNGNLVSMELRTGRIIWTRKYSSFNELTTAGLSLFLVDD 303
            R+ DVD TP+I+   +YA++YNGNL +++LR+G+I+W R+     +L      ++LVD 
Sbjct: 243 DRLNDVDTTPVIVNGVVYALAYNGNLSALDLRSGQILWKREIGGVKDLIVDAGRIYLVDQ 302

Query: 304 HSRIYSVDRRNGLELWSNSELVNRTLTSPEVYKDYLVVGDFEGYLHFIDRSTGSIVGRIQ 363
             R+ +++   G+ +W  S+L++R LTSP +Y  YL+VGD EGYLH+++ + G  V + +
Sbjct: 303 DDRVIALNTDGGVAIWRQSDLLHRNLTSPVLYNGYLIVGDSEGYLHWLNTTDGRFVAQQE 362

Query: 364 VDSSGLFSQPIVVDDKIYVQGRSGKLAVVT 393
           +DSSG  ++P+V  DK+ +Q + G++  +T
Sbjct: 363 LDSSGFQTEPVVASDKLLIQSKDGEVYAIT 392