Pairwise Alignments

Query, 395 a.a., PQQ enzyme repeat domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 450 a.a., Pyrrolo-quinoline quinone (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  100 bits (248), Expect = 1e-25
 Identities = 78/359 (21%), Positives = 151/359 (42%), Gaps = 22/359 (6%)

Query: 44  EVSWSASVGDGVGDYYSRLT--PAVRYGKIFAADRYGAVMAFDEASGEQVWRKDFSEEFR 101
           +++W A +G+G     +R+T  P V  G++F  D    V AF   +G  +W++D +    
Sbjct: 97  QLAWRAEIGEG-STRRNRITAAPVVSDGRVFTLDSLATVSAFG-TNGALLWQQDLTPPTD 154

Query: 102 DNALAKNKGARLAAGITAARNKLFIGGESGLLAALNAEDGQVLWHVIAGGELLSKPTVAD 161
               A ++G     G+  + + L++    G L ALN  DG   W       +    TV  
Sbjct: 155 ----APDEGT--GGGLAVSGDTLYVSSGFGSLTALNVVDGTERWTQRMDAPISGSATVEG 208

Query: 162 DVVVVSTSSGSLEAYNVDTGAKLWVYDMQLPNLTLRGTGSAAYEAGGFFIGTADGKVAVV 221
           +V    +      A +   G  LW         ++ G G+ A       +     +++  
Sbjct: 209 NVAYAVSRDSVAWALDTRNGRVLWTLPGVPSTTSILGGGAPALTDRLVILPFPSSEISGA 268

Query: 222 VKNNGQAAWEQAIYNPTGGNEFTRMADVDMTPLILGDNLYAVSYNGNLVSMELRTGRIIW 281
           ++ +G   W  A+     G  +T  +D++  P+++G  ++A +  G + +++  +G  +W
Sbjct: 269 LRQSGVRIWGSAVSGARLGRGYTAFSDINSDPVVVGRRIFAGNAAGRVAALDAVSGERLW 328

Query: 282 TRKYSSFNELTTAGLSLFLVDDHSRIYSVDRRNGLELW--------SNSELVNRTLTS-- 331
           T +  +F  +  AG  LF V D + +  +D   G   W         + E   + + +  
Sbjct: 329 TAREGAFGPVWPAGGELFFVSDQNGLVRMDADTGAVTWIVQLPYYTDDRERRRKAIFAHY 388

Query: 332 -PEVYKDYLVVGDFEGYLHFIDRSTGSIVGRIQVDSSGLFSQPIVVDDKIYVQGRSGKL 389
            P +    L++   +G L   D  +G   G I +   G  + P+V +  +YV    G+L
Sbjct: 389 GPVLAGGRLIIASGDGRLRLFDPVSGLPQGEIAL-PDGAAAPPVVANRTLYVVTTGGEL 446



 Score = 45.8 bits (107), Expect = 2e-09
 Identities = 54/266 (20%), Positives = 99/266 (37%), Gaps = 58/266 (21%)

Query: 142 QVLWHVIAG------GELLSKPTVADDVVVVSTSSGSLEAYNVDTGAKLWVYDMQLP-NL 194
           Q+ W    G        + + P V+D  V    S  ++ A+  + GA LW  D+  P + 
Sbjct: 97  QLAWRAEIGEGSTRRNRITAAPVVSDGRVFTLDSLATVSAFGTN-GALLWQQDLTPPTDA 155

Query: 195 TLRGTGSAAYEAGG-FFIGTADGKVAVVVKNNGQAAWEQAIYNPTGGNEFTRMADVDMTP 253
              GTG     +G   ++ +  G +  +   +G   W Q +  P  G+            
Sbjct: 156 PDEGTGGGLAVSGDTLYVSSGFGSLTALNVVDGTERWTQRMDAPISGSA----------- 204

Query: 254 LILGDNLYAVSYNGNLVSMELRTGRIIWTRKYSSFNELTTAGLSLFLVD-------DHSR 306
            + G+  YAVS +    +++ R GR++WT            G +  L D         S 
Sbjct: 205 TVEGNVAYAVSRDSVAWALDTRNGRVLWTLPGVPSTTSILGGGAPALTDRLVILPFPSSE 264

Query: 307 IYSVDRRNGLELWSNSELVNRTLTSPEVYKDYLVVGDFEGYLHFIDRSTGSIVGRIQVDS 366
           I    R++G+ +W ++                                +G+ +GR     
Sbjct: 265 ISGALRQSGVRIWGSAV-------------------------------SGARLGRGYTAF 293

Query: 367 SGLFSQPIVVDDKIYVQGRSGKLAVV 392
           S + S P+VV  +I+    +G++A +
Sbjct: 294 SDINSDPVVVGRRIFAGNAAGRVAAL 319