Pairwise Alignments

Query, 395 a.a., PQQ enzyme repeat domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 392 a.a., outer membrane protein assembly factor BamB from Ralstonia sp. UNC404CL21Col

 Score =  183 bits (465), Expect = 6e-51
 Identities = 116/374 (31%), Positives = 178/374 (47%), Gaps = 20/374 (5%)

Query: 16  AMLSACS--SSDVEEEPVSELTAIQATVFPEVSWSASVGDGVGDYYSRLTPAVRYGKIFA 73
           A+L  CS  SS  + EP ++L  +Q  +     WS SVG   G Y   + PAV    ++ 
Sbjct: 29  AVLGGCSLFSSKNKHEP-AKLKEVQQVLAVRQVWSVSVGKS-GRYV--MQPAVAGNNVYV 84

Query: 74  ADRYGAVMAFDEASGEQVWRKDFSEEFRDNALAKNKGARLAAGITAARNKLFIGGESGLL 133
           +   G V A D A+G  +W+     +             L +G  +      + GE G +
Sbjct: 85  SAAGGTVTALDGATGRTLWQGKADVD-------------LTSGPGSDGTLTAVAGEKGAV 131

Query: 134 AALNAEDGQVLWHVIAGGELLSKPTVADDVVVVSTSSGSLEAYNVDTGAKLWVYDMQLPN 193
            A + E G   W V   GE+L+ P V   +V+V T+ G +   +   G + W+Y      
Sbjct: 132 VAFD-EKGAQKWKVAVNGEVLTAPLVGQGLVIVRTTDGRVLGLDPANGERKWIYQRSPSA 190

Query: 194 LTLRGTGSAAYEAGGFFIGTADGKVAVVVKNNGQAAWEQAIYNPTGGNEFTRMADVDMTP 253
           L LR +    +      +G A GK+  +  +NG   WE A+  P G +E  R+ DV   P
Sbjct: 191 LNLRSSLPMVFAGDNVILGFAGGKLGALSASNGALRWEAAVSYPRGVSEIERLNDVTGAP 250

Query: 254 LILGDNLYAVSYNGNLVSMELRTGRIIWTRKYSSFNELTTAGLSLFLVDDHSRIYSVDRR 313
            I G  + A S+ G +   +  TG   W R +SS + +T     LF  D+ S +Y  + +
Sbjct: 251 SISGSQVCAASFQGRVACFDTSTGAPRWGRDFSSPSGVTQDDDGLFAADEKSVVYGFNAQ 310

Query: 314 NGLELWSNSELVNRTLTSPEVYKDYLVVGDFEGYLHFIDRSTGSIVGRIQVDSSGLFSQP 373
           NG +LW N  L+ R L +P  +   ++VGD EG+LHF+ R  G  V R++ DSS + + P
Sbjct: 311 NGADLWKNDALLWRDLGTPLAFGRAVIVGDSEGWLHFLSRDDGKFVARVKTDSSAIGAAP 370

Query: 374 IVVDDKIYVQGRSG 387
           +VV   + VQ R G
Sbjct: 371 VVVGQTLVVQTRGG 384