Pairwise Alignments

Query, 1287 a.a., serine protease, subtilase family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 1038 a.a., Outer membrane autotransporter barrel from Pseudomonas syringae pv. syringae B728a

 Score = 46.2 bits (108), Expect = 2e-08
 Identities = 54/170 (31%), Positives = 76/170 (44%), Gaps = 26/170 (15%)

Query: 501 RGEISLADKVTNMFFAAGVIIR-NTPTSNQNMASARYALPSLLINELDGKQLLEWMKRTD 559
           +G I  A       FAAG     N P +   MA   Y +P +  N L    L +      
Sbjct: 262 QGAIDAARSGVVTIFAAGNDYNLNNPDA---MAGLGYFVPDIAPNWLTVAALQQ------ 312

Query: 560 TPKVSISAANAEYDQANADILADFSSRGPYKWQTELMVPHIAAPGVDIYAAYADEMPFTS 619
            P  + +AA   Y       L+ FSSR  Y          ++APG  IY++  +    TS
Sbjct: 313 NPDAA-AAATTPYT------LSTFSSRCGYTASF-----CVSAPGTRIYSSVLNG---TS 357

Query: 620 VNDAAPSDFAFLSGTSMASPHVAGSAALLRQLHPDWTPAEIQSAMMLTAT 669
           + D     +A  +GTSMA+PHVAGS A+L +  P  T A++   +  TAT
Sbjct: 358 LADLTVG-WANKNGTSMAAPHVAGSMAVLMERFPYMTGAQVADVLKTTAT 406