Pairwise Alignments

Query, 1287 a.a., serine protease, subtilase family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 1645 a.a., peptidase S8 and S53, subtilisin, kexin, sedolisin (RefSeq) from Shewanella loihica PV-4

 Score =  497 bits (1280), Expect = e-144
 Identities = 376/1145 (32%), Positives = 566/1145 (49%), Gaps = 135/1145 (11%)

Query: 48   SGRSRYIIQLMQAPAATHAAQL----FNKAPQDRTSVSKASITQKLPQKISHLLQTSQLE 103
            SG   YI+QL   P AT+A  +       AP++R+ ++K  +           + T+  +
Sbjct: 94   SGVQTYIVQLDAEPLATYAGDVPGYAATTAPKNRSVIAKGRVA----------VNTASAQ 143

Query: 104  QYRQEIAHHQGIFKTTASKTLGRPLQAKMQFDTAFNGMVLELTPDEAKTMLTVPQVLKVI 163
             Y+Q +   Q  F  +A +  G  ++   QF  A N MV+E+T ++A  M     V ++ 
Sbjct: 144  SYKQYLVSKQDKFIASARQA-GASVKVTKQFTLASNAMVVEMTQEDAIKMSHQRGVTRIS 202

Query: 164  KETPTELQTDNGPQLIGASNLWDGNATG--LAAKGDGIIIGILDTGINTDNRAFSAVGDD 221
                 +L+TD GP+ IGA  +W G AT   LAAKG+G+++GI+DTGINTD+ AF+   D+
Sbjct: 203  PNRVFQLRTDRGPEFIGADKVWQGTATSGSLAAKGEGMVVGIIDTGINTDHPAFA--DDE 260

Query: 222  GHNIINPLGSGNYLGDCVKDATLCNDKLIGVYSFPLVTDEYNG-----------LRPANG 270
             +   NP G+ N +GDCV    LCN+KLIG++S+P +TD Y             +RPANG
Sbjct: 261  AYATTNPFGADNGVGDCVDSPELCNNKLIGLHSYPEITDIYAAPEFQTGGRPVMIRPANG 320

Query: 271  EDYNGHGSHTASTAAGNALVNVPVLMPNIGEEVGDGIETGTVLSNISGVAPHANIISYQV 330
            EDYNGHGSHTAST AGN L + P L    GE   DGI         SGVAP A+II+YQV
Sbjct: 321  EDYNGHGSHTASTVAGNTLTDTP-LQTFSGEATSDGINVPFNFPQTSGVAPRAHIIAYQV 379

Query: 331  C-------DQSGCYPSLTIASVELAIKAGVDVLNYSIGPRGGVQNDPWNTASDIAFLSAR 383
            C         +GC  S  +++ E AI  GVD +N+SIG   G ++ PW    ++AFL+AR
Sbjct: 380  CWPGGSGDPYAGCPESAILSAFEDAIADGVDAINFSIG---GAESLPWADPMELAFLAAR 436

Query: 384  EAGIFVAMAAGNAGPDAETVGNVAPWAISVAASSHQRVWSHVLSGSGVTGDPLPQIEGL- 442
            EAGI VA+AAGN G    +  + +PW  +V AS+H R        +GV    L + EG+ 
Sbjct: 437  EAGISVAVAAGNNGAYWSS-DHSSPWVTTVGASTHDRQLD-----AGVK--TLGEFEGVS 488

Query: 443  ADVFTSNGVINALSDETEIVYAGDYKDIN---GNSLALCNSRVYFFDPVMADLRGKVVIC 499
            A      G   +     ++V A  Y D +   G + A CN+      P       ++V+C
Sbjct: 489  APTAPMQGKSFSGGITGQVVMAEKYADPDLNDGYNAASCNAPF----PAGTFTSDQIVVC 544

Query: 500  DRGEISLADKVTNMFF--AAGVIIRNTPTSNQNMASARYALPSLLINELDGKQLLEWMKR 557
            +RG+I+  DK  N+    A G I++N   S  N+ +  + LP + I   +  +L  W+ R
Sbjct: 545  ERGDIARVDKAKNVAAGGAGGFILQNISYSADNLVADNFVLPGIQIKAAERYKLRNWVNR 604

Query: 558  T-DTPKVSISAANAEY--DQANADILADFSSRGPYKWQTELMVPHIAAPGVDIYAAYADE 614
              +  + +IS  + +Y  D    + LA FSS GP +    L VP + APGVDIYAA AD+
Sbjct: 605  NGEAARATISDYSNDYYLDAELGNNLATFSSMGPSRTNNTL-VPDLTAPGVDIYAANADD 663

Query: 615  MPFTSVNDAAPSDFAFLSGTSMASPHVAGSAALLRQLHPDWTPAEIQSAMMLTATTNVLK 674
             PFT    A  SD+ F+SGTSMA+PHV G+  LL Q+HPDWTPAEIQSA+MLTA   +L 
Sbjct: 664  QPFTYSPTA--SDWTFMSGTSMATPHVTGAMTLLSQIHPDWTPAEIQSALMLTAGPVMLN 721

Query: 675  EDGKT--PAGIFDIGSGRLQIDKAAQAGLVMDVPIDEYKAANPELGGDVTSLNLPVLTST 732
               +   P   F  G+G + + +AA  GL+MD  ++ Y+ A+P  GG V  LN+P +   
Sbjct: 722  TGYQLIEPYYNFMAGAGAINVARAADTGLLMDETVENYRNADPSNGGLVNWLNIPSMVEM 781

Query: 733  QCMNSCSWTRTLRATRDGSWTVSSNGNVDGVTISASPSSFDIKEGES----VTVTFTANI 788
            +C ++CSW RT++ATRDG+WTV   G  +G  ++ SP+ F +K GE+    VT T  + I
Sbjct: 782  ECTDTCSWMRTVKATRDGTWTVEGIGKEEGFELTVSPAQFSLKAGETQSIIVTATPPSKI 841

Query: 789  ALRA-------------NEDWSF--MQVNLAPSDNSPMLSLPVAVKPLIALVPAFITQDY 833
             ++              N+D  F    V     D SP + +PV V      +P     + 
Sbjct: 842  EIKVDPEEADGPWDAVLNKDTFFNGQVVLKEQGDRSPEVHMPVVVATSGEQLPVSHHFEI 901

Query: 834  FWNKGDLEL---ADFHFRYPENLLFNIKPLEKATSYHLTLAADSDNRSPF---DNVNDGT 887
              ++G   L    D + +        +KP  +  S  LT         PF   D +  G 
Sbjct: 902  TRDQGTETLTVNTDAYSQLTPRFYGPVKP--EVYSNRLTAV------GPFLRQDYIEKGW 953

Query: 888  ALSFINVPDGSSNLRVIVGESSAI----DID---------VFIGLDSNNNG--IP----- 927
             +  I VP+G+  L V V ++  +    D++         V +GLD N+NG  +P     
Sbjct: 954  DIRTITVPEGAKRLVVEVQKAGVVSTLEDLNPRYTTPHPFVIVGLDENDNGTFVPDSEAD 1013

Query: 928  ------EIVELTQACATSMNVGEACRL-NAGSGRYWVLAHNYKGSGDPLDAVRLDVLLQP 980
                  E    T   +TS      C L N   G YWV      G G+ +D      ++  
Sbjct: 1014 SSAIKAEYSAETVCLSTSQAEHNYCSLENPAPGTYWVATAMAYGQGE-VDVDTGYAIIME 1072

Query: 981  NTETLPALVTIPNMSTKPYDALSAHLSWSGDMIEG--VYYSELEVFDRNTPTAARAIARS 1038
            + +     +T P  S          ++W+    +   +YY   ++   N P A   +  +
Sbjct: 1073 DDDRGNLSITGP-ASHDGNGNYEIGINWNLPQTQAGDIYYGGFDL--GNMPGAEGTLGFT 1129

Query: 1039 NLVVNRVKPSVKIDLVKGDLSHRKEAELNIQLPTNPTSDSLTYTLNLAMADNLTI--TDV 1096
             L + R   +V  ++ +         ++++++  N  +    Y   L + + + +    +
Sbjct: 1130 ALDIRRADDAVTWEVSQDKARSMDVVDISLKIAANMETQDRQYQFALQLPEGMRLAPATL 1189

Query: 1097 ETNGD 1101
             TN D
Sbjct: 1190 TTNND 1194