Pairwise Alignments

Query, 1287 a.a., serine protease, subtilase family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 1199 a.a., peptidase S8 and S53, subtilisin, kexin, sedolisin (RefSeq) from Shewanella loihica PV-4

 Score =  497 bits (1280), Expect = e-144
 Identities = 372/1133 (32%), Positives = 565/1133 (49%), Gaps = 94/1133 (8%)

Query: 53   YIIQLMQAPAATHAAQLFNKAPQDRTSVSKASITQKLPQKISHLLQTSQLE-QYRQEIAH 111
            Y ++  +AP A++   L   A       +   + Q   Q    L   S+   QYR  +  
Sbjct: 61   YFVRFKEAPVASYDGSLAGFA------ATNIQVNQSNKQASGLLNSQSKASLQYRGYLKQ 114

Query: 112  HQGIFKTTASKTLGRPLQAKMQFDTAFNGMVLELTPDEAKTMLTVPQVLKVIKETPTELQ 171
             Q   K   +  L R L    ++    N M ++L P EA  +   P+VL V       +Q
Sbjct: 115  QQAKIKQRLNGKLKRILTPTQEYQLIVNAMAVKLKPGEADIIAKDPEVLSVEPIGLHFIQ 174

Query: 172  TDNGPQLIGASNLWDGNATGLAAKGDGIIIGILDTGINTDNRAFSAVGDDGHNIINPLGS 231
            T  GP+ IGA  +W G+    A KG+G+I+G++DTGIN ++ +F+ VG DG+   NPLG 
Sbjct: 175  TSTGPEFIGAKQVWQGDEIVEATKGEGVIVGVMDTGINANHPSFAEVGADGYQHKNPLGD 234

Query: 232  GNYLGDCVKDATLCNDKLIGVYSFP------------LVTDEYNGL--RPANGEDYNGHG 277
            G YLGDC + +  CN KLIG+ S+P            L    Y  L  +   G D+NGHG
Sbjct: 235  GQYLGDCQQYSQFCNGKLIGIISYPELIQYRQDTADSLDDPAYEDLANKVKVGYDFNGHG 294

Query: 278  SHTASTAAGNALVNVPVLMPNIGEEVGDGI--ETGTVLSNISGVAPHANIISYQVCDQSG 335
            SH ASTA+GN L +V   +  + EE G  I  ++      ISGVAPHAN++SYQVCD +G
Sbjct: 295  SHVASTASGNILHDVNFYL-QVQEEDGTIIAEKSAFEFDAISGVAPHANLVSYQVCDDAG 353

Query: 336  -CYPSLTIASVELAIKAGVDVLNYSIGPRGGVQNDPWNTASDIAFLSAREAGIFVAMAAG 394
             CYP  T+ ++E AI+ GV VLNYS+G   G   DPW++    AFL+AREAGI VA+AAG
Sbjct: 354  SCYPEFTLKAIEHAIENGVQVLNYSVG---GSAKDPWSSIDAEAFLNAREAGIHVAVAAG 410

Query: 395  NAGPDAETVGNV--APWAISVAASSHQRVWSHVLSGSGVTGDPLPQIEGLADVFTSNGVI 452
            NAGP A T+G+   APW  +VAA +H   +    S + + G   P  + +       GV 
Sbjct: 411  NAGPSASTIGSPGNAPWVTTVAAYTHDLEFKQK-SLTNMNGGETPPADMMGF-----GVT 464

Query: 453  NALSDETEIVYAGDYKDINGNSLALCNSRVYFFDPVMA-DLRGKVVICDRGEISLADKVT 511
              +S +  +V A      N    A C       DP  A    G++V+C+RG  +   K  
Sbjct: 465  KGVSGK--VVLAASVNSDN----AQCT------DPFEAGSFDGEIVVCERGTNARVRKGI 512

Query: 512  NMFF--AAGVIIRNTPTSNQNMASARYALPSLLINELDGKQLLEWMKRTDTPKVSISAAN 569
            N+    A G+I+ N P    ++ +  + LP++ +N  DG++L +W+   +  + +I A+ 
Sbjct: 513  NVKEGGAGGMILINMPDGVDSLHNDNHVLPAIQLNAADGERLTQWLASGEGHQATIEASE 572

Query: 570  AEYDQANADILADFSSRGPYKWQTELMVPHIAAPGVDIYAAYADEMPFTSVNDAAPSDFA 629
               + +  DI   F+SRGP      +  P IAAPGVDIYAA A++  F       P  FA
Sbjct: 573  TTRNASLGDIAGVFTSRGPNLPYPNIFSPDIAAPGVDIYAANAEDRLFEGQIGHIP--FA 630

Query: 630  FLSGTSMASPHVAGSAALLRQLHPDWTPAEIQSAMMLTATTNVLKEDGKTP----AGIFD 685
             LSGTSMA+PHV G+ ALL+  HPDWTPA+ QSA M TA     K+D        +  FD
Sbjct: 631  SLSGTSMATPHVTGAYALLKAAHPDWTPAQAQSAFMSTAHQTTYKDDDYDGTLERSDFFD 690

Query: 686  IGSGRLQIDKAAQAGLVMDVPIDEYKAANPELGGDVTSLNLPVLTSTQCMNSCSWTRTLR 745
             G+G L+I++A +AGL++D+    Y AANPE+GGD ++LN   +   QC+++CSWTRT+ 
Sbjct: 691  QGAGSLRINQALKAGLLLDIDKAGYLAANPEMGGDPSALNTSSMVQNQCISNCSWTRTVT 750

Query: 746  ATRDGSWTVSSNGNVDGVTISASPSSFDIKEGESVTVTFTANIALRANEDWSFMQVNLAP 805
            AT+  SW+        G T+  +PSSF +  GES  +T  A   +   ++W    + L  
Sbjct: 751  ATQASSWSAEYEYLNPGFTLEVTPSSFSLNAGESQVLTIKATANINLVDEWVHGYIKLNN 810

Query: 806  SDNSPM-LSLPVAVKPLIALVPAFITQDYFWNKGDLELADFHFRYPENLL----FNIKPL 860
            +D S     L   +      V   ++ +       L + D  F    N L    F +   
Sbjct: 811  ADTSMSDTHLQATIGFKAGQVAEEVSAEMNNVDNQLVIEDI-FTSGSNALQVKGFGLYKA 869

Query: 861  EKATSYHLTLAADSDNRSPFDNVNDGTALSFINVPDGSSNLRVIVGESSAIDIDVFIGLD 920
            +  T   +  + D++  SP  N     ++  + V   +  L V + ++++ D+D+++G+D
Sbjct: 870  QSFTGSAIGSSNDAERGSPHSNPEVIFSVPTV-VKPYTKRLVVEITDTTSPDMDLYVGID 928

Query: 921  SNNNGIPEIVELTQA---CATSMNVGEACRL-NAGSGRYWVLAHNYKGS-GDPLDAVRLD 975
             N +G+P+  E+  +    +  ++  E C L N  +G YW+ AHNY+G   D  D V L+
Sbjct: 929  ENGDGMPDAYEMYYSLLCLSGEVDSKERCILENPPTGNYWIFAHNYEGRVEDEADEVTLE 988

Query: 976  VLLQPNTETLPALVTIP-----------NMSTKPY--DALSAHLSWSGDMIEGVYYSELE 1022
            +     +      +T P           ++S   Y  D+LS     +G+     YY  LE
Sbjct: 989  ITHVNYSNQASFDITAPSQVAQDERFDVSLSVNGYLDDSLSLQPLEAGE----TYYGLLE 1044

Query: 1023 VFDRNTPTAARAIARSNLVVNRVKPSVKIDLVKGDLSHRKEAELNIQLPTNPT---SDSL 1079
            +    T    R I  + + V  ++P V++      +     A+L  QL    +   S  L
Sbjct: 1045 M--GTTSELKRNIGATLIKVKGLEP-VEVPQNTAPVLANPIADLQTQLSEQGSAVVSLDL 1101

Query: 1080 TYTLNLAMADNLTITDVETNGDISLNHDKNNIKVTLAPGETSTLIVAKINQKS 1132
            +   + A  D LT++     G I+L+  +  +  T A GE   +I A   + S
Sbjct: 1102 SQVFSDAEGDTLTLSATGVEG-ITLDGTQLEMNFT-ASGEYPIVISASDGELS 1152