Pairwise Alignments

Query, 106 a.a., negative regulator of flagellin synthesis FlgM (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 107 a.a., flagellar biosynthesis anti-sigma factor FlgM from Vibrio cholerae E7946 ATCC 55056

 Score = 69.3 bits (168), Expect = 1e-17
 Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)

Query: 5   ISKFNAGTAAQVRSNSTKQSSESEQSSQ---VAAKSTQQKGDSFVITAQAQQLQGAHTKM 61
           I    AG +    S +  +SS++  SS      ++S+    D+  +++Q++ +   H++M
Sbjct: 4   IDNIRAGQSLNTTSRTNVRSSDASNSSTQSGAVSRSSASGQDAVSLSSQSKAIGEMHSEM 63

Query: 62  ASLPEVDQKKVAEIKQAIAEGRYKIDPEKLAANIANFEAEL 102
           AS P  D  KVA IK+AIA G Y +DPEKLA N+  FE EL
Sbjct: 64  ASRPSFDSAKVAAIKEAIANGSYVVDPEKLADNMIKFEKEL 104