Pairwise Alignments

Query, 224 a.a., flagellar L-ring protein FlgH (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 221 a.a., flagellar basal body L-ring protein from Dechlorosoma suillum PS

 Score =  117 bits (293), Expect = 2e-31
 Identities = 72/217 (33%), Positives = 116/217 (53%), Gaps = 10/217 (4%)

Query: 6   LLAAALLLTACSSTPKKPIADDPFYAPVYPEAPPTKIAAT--GSIYQDSQAASLYSDIRA 63
           ++    LL+ C+S P   +     + P+     P    AT  G I+  + +  L+ D RA
Sbjct: 8   IIGLLTLLSGCASVPPTNV-----HQPMTARPQPRNDLATNNGGIFMQTASRPLFEDRRA 62

Query: 64  HKVGDIITIVLKEATQAKKSAGNQIKK-GSDMTLDPVYAGGSNLSLGGIPLDLRYKDSMN 122
             VGD I + + E TQA        +K G+        AG    S  G+       ++ +
Sbjct: 63  RFVGDTIVVNIVENTQASIKGNTSAEKTGAINASVTALAGVPGKSFQGLNAQTSSSNTFD 122

Query: 123 TKRESDADQSNSLDGSISANIMQVLNNGNLVVRGEKWISINNGDEFIRVTGIVRSQDIKP 182
            K ES +  SN   G+++A +++VL NGNL+V GEK ++I  G EF+RV+G+V    I  
Sbjct: 123 GKGESGS--SNVFTGTMTATVIEVLPNGNLLVSGEKQVAIGQGQEFVRVSGVVNPYMITA 180

Query: 183 DNTIDSTRMANARIQYSGTGTFAEAQKVGWLSQFFMS 219
            N ++S++MA+ARI+Y  +G   EAQ +GWL++FF++
Sbjct: 181 ANAVNSSQMADARIEYKSSGIINEAQVMGWLARFFLT 217