Pairwise Alignments

Query, 224 a.a., flagellar L-ring protein FlgH (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 238 a.a., flagellar basal body L-ring protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  120 bits (302), Expect = 2e-32
 Identities = 80/245 (32%), Positives = 132/245 (53%), Gaps = 28/245 (11%)

Query: 1   MARYLLLA--AALLLTACSSTPKKPIADDPFYAPVYPEAPPTKIAATGSIYQDSQAASLY 58
           M R LL A  A LLL+ C++  ++P    P   P     P    A  GS+Y +S +  L+
Sbjct: 1   MKRRLLAAGCAMLLLSGCNAARQQPSPVPPVTQPQAYAEPEDTAANPGSLYSESDSEFLF 60

Query: 59  SDIRAHKVGDIITIVLKEATQAKKSAGNQIKKGS-------------DMTLDPVY-AGGS 104
           SD RA +VGDI+ + + E  +AK  A     K S               +++P+  AG  
Sbjct: 61  SDNRARRVGDIVLVKVVETDKAKNKADTTADKTSTNELGVSAFFGQSSASINPINPAGPF 120

Query: 105 NLSLGGIPL-----DLRYKDSMNTKRESDADQSNSLDGSISANIMQVLNNGNLVVRGEKW 159
           + ++G  P+       ++  +  TKRES      ++  +I+A +++VL  G + V G + 
Sbjct: 121 SGAVGANPILGTSSTSKHSATGETKRES------TVTTTIAARVLRVLPGGLMEVEGARE 174

Query: 160 ISINNGDEFIRVTGIVRSQDIKPDNTIDSTRMANARIQYSGTGTFAEAQKVGWLSQFFMS 219
             +N+  ++I V+G+VR++D+  DN++ S++MANARI+Y G GT A+ QK GW ++  M 
Sbjct: 175 TRVNDETQYIVVSGLVRARDVSSDNSVTSSQMANARIEYYGKGTLADKQKPGWFTR-LMD 233

Query: 220 DWWPF 224
           + WPF
Sbjct: 234 NVWPF 238