Pairwise Alignments

Query, 224 a.a., flagellar L-ring protein FlgH (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 233 a.a., flagellar basal body L-ring protein from Marinobacter adhaerens HP15

 Score =  192 bits (487), Expect = 6e-54
 Identities = 96/221 (43%), Positives = 147/221 (66%), Gaps = 7/221 (3%)

Query: 5   LLLAAALLLTACSSTPK-KPIADDPFYAPVYPEAPPTKIAATGSIYQDSQAASLYSDIRA 63
           +++   +LL  C++  + + + DDP +APV P+A   + +A+GSIYQ S+  + Y D  A
Sbjct: 17  VIVMLLILLQGCTAMSRPRAVPDDPEFAPVRPQAMMQRDSASGSIYQVSRNYNFYGDTVA 76

Query: 64  HKVGDIITIVLKEATQAKKSAGNQIKKGSDMTL-DPVYAGGSNLSLGGIPLDLRYKDSMN 122
             VGD++T+ L+E+T A K+A   I K ++ TL +P   G  N  +     +  +    +
Sbjct: 77  LNVGDVLTVNLQESTSASKNAETSITKDNETTLPNPTILGKDNFGI-----NTSFNHERD 131

Query: 123 TKRESDADQSNSLDGSISANIMQVLNNGNLVVRGEKWISINNGDEFIRVTGIVRSQDIKP 182
            +  ++ADQSNSL GSI+  + +VL NG L +RGEKW+S+ NGDE+IR+TG+VR QDI+P
Sbjct: 132 FQGAAEADQSNSLAGSITVTVTEVLPNGVLRIRGEKWLSLTNGDEYIRLTGLVRPQDIQP 191

Query: 183 DNTIDSTRMANARIQYSGTGTFAEAQKVGWLSQFFMSDWWP 223
           DNT+ S R+A+AR  Y GTG F +A ++GWL++FF S+WWP
Sbjct: 192 DNTVASNRIADARFAYGGTGDFDQANQMGWLARFFNSEWWP 232