Pairwise Alignments

Query, 224 a.a., flagellar L-ring protein FlgH (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 236 a.a., flagellar basal body L-ring protein FlgH from Pantoea sp. MT58

 Score =  124 bits (310), Expect = 2e-33
 Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 13/223 (5%)

Query: 7   LAAALLLT--ACSSTPKKPIADDPFYAPVYPEAPPTKIAATGSIYQDSQAAS-----LYS 59
           L A+LLLT   C+  P+ P+ +    A   P APP      GSI+Q     +     L+ 
Sbjct: 13  LVASLLLTLNGCALVPRTPLVEGATTAQPMPSAPPV---VNGSIFQGVAPLNYGYQPLFE 69

Query: 60  DIRAHKVGDIITIVLKEATQAKKSAGNQIKK--GSDMTLDPVYAGGSNL-SLGGIPLDLR 116
           D R   +GD +TI L+E   A KS+     +   + + +  V  G + L   GG   +L 
Sbjct: 70  DRRPRNIGDTLTITLQENVSASKSSSASASRDGSNSLGITGVPTGLAGLVGAGGEKANLS 129

Query: 117 YKDSMNTKRESDADQSNSLDGSISANIMQVLNNGNLVVRGEKWISINNGDEFIRVTGIVR 176
            +   +   +  A  +N+  G+I+  + QVL+NGNL V GEK I+IN G EFIR +G+V 
Sbjct: 130 AEGKNDFAGKGGASANNTFTGTITVTVDQVLSNGNLHVVGEKQIAINQGTEFIRFSGVVN 189

Query: 177 SQDIKPDNTIDSTRMANARIQYSGTGTFAEAQKVGWLSQFFMS 219
            + I   N + ST +A+ARI+Y G G   EAQ +GW  +FF++
Sbjct: 190 PRTISASNAVLSTAVADARIEYVGNGYINEAQTMGWFQRFFLN 232