Pairwise Alignments

Query, 272 a.a., flagellin (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 282 a.a., Flagellin, C-terminal:Flagellin, N-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  244 bits (624), Expect = 1e-69
 Identities = 138/282 (48%), Positives = 192/282 (68%), Gaps = 11/282 (3%)

Query: 1   MAITVNTNVTSLKAQKNLNTSASDLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG 60
           MA+TVNTNVTSL  QKNL+ ++  L+TSM RLSSGL+I S+KDDAAGL I+ ++NSQ++G
Sbjct: 1   MALTVNTNVTSLSVQKNLSRASDALSTSMGRLSSGLKIMSSKDDAAGLNIATKINSQIKG 60

Query: 61  LEVGMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTVQSENGANSSADLSALKAEMDQLA 120
             + ++NAND +SIAQ AEGA+QE TN+LQRMR+L VQS N +NS+ D  AL  E  Q++
Sbjct: 61  QTMAIKNANDGMSIAQTAEGALQESTNILQRMRELAVQSRNDSNSATDRVALNKEFTQMS 120

Query: 121 NEIDEIGKTTAFGTTKLLAGGFSAGKNFQVGAQDGEDIKVTVKAS---NKSSLSVGS--- 174
           +E+  I  +T      L+ G  S    FQVG+  G   ++++  S   + ++L VGS   
Sbjct: 121 SELTRIANSTNLNGKNLIDGSAST-MTFQVGSNSGASNQISLSLSASFDANTLGVGSAIT 179

Query: 175 -LGNTTSAAR---ASSLKKIDAAIKTIDAQRADLGAIQNRLAHNISNSANTQANVADAKS 230
            +G+ ++AA    ++S+  ID+A++TI+  R+DLGA QNRL+  ISN  N   N + A  
Sbjct: 180 IVGSDSAAAETNFSASIAAIDSALQTINNTRSDLGAAQNRLSSTISNLQNINENASAALG 239

Query: 231 RIVDVDFAKETSQMTKNQVLQQTGSAMLAQANQLPQVALSLL 272
           RI D DFA ET+Q+TK Q LQQ  +++LAQANQLP   L LL
Sbjct: 240 RIQDTDFAAETAQLTKQQTLQQASTSILAQANQLPSAVLKLL 281