Pairwise Alignments

Query, 272 a.a., flagellin (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 274 a.a., flagellin from Rhodopseudomonas palustris CGA009

 Score =  159 bits (402), Expect = 6e-44
 Identities = 90/270 (33%), Positives = 153/270 (56%), Gaps = 2/270 (0%)

Query: 5   VNTNVTSLKAQKNLNTSASDLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLEVG 64
           ++TN  +  A + LN +++   +S+ +L+SG RI SA DDAAGLAIS R++S V  L+  
Sbjct: 4   ISTNTAANSAVRYLNINSAQETSSLSKLASGSRITSASDDAAGLAISTRISSDVTTLQQA 63

Query: 65  MRNANDAISIAQIAEGAMQEQTNMLQRMRDLTVQSENGANSSADLSALKAEMDQLANEID 124
             NA+ A++I Q A+G     +++L RM+ L  +S +G  + +  + + +E  QL+++ID
Sbjct: 64  ATNASQAVAILQTADGGASNISDILARMKSLASESASGTTTDSSRAYINSEFSQLSSQID 123

Query: 125 EIGKTTAFGTTKLLAGG--FSAGKNFQVGAQDGEDIKVTVKASNKSSLSVGSLGNTTSAA 182
            I   T + +  LL G   F++G    VG Q  + I +T+     S+L V +L  ++ + 
Sbjct: 124 SIASGTRYSSQSLLDGTSVFASGVAVLVGTQSSDSITITLSNLKASTLGVSTLDVSSLSG 183

Query: 183 RASSLKKIDAAIKTIDAQRADLGAIQNRLAHNISNSANTQANVADAKSRIVDVDFAKETS 242
             ++L  +D AI T+ + RA +GA ++R   +  + +    N+  A S I DVD A E +
Sbjct: 184 ATTALSALDTAINTVSSARASIGAQESRFNFSADSISTQTQNLQSANSAIKDVDIAAEQA 243

Query: 243 QMTKNQVLQQTGSAMLAQANQLPQVALSLL 272
           +++  +V  Q   +  A ANQ+PQ  L LL
Sbjct: 244 KLSSAEVKTQAAVSAEAAANQMPQYLLKLL 273