Pairwise Alignments

Query, 272 a.a., flagellin (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 284 a.a., flagellin/flagellar hook associated protein from Dechlorosoma suillum PS

 Score =  238 bits (608), Expect = 8e-68
 Identities = 134/285 (47%), Positives = 187/285 (65%), Gaps = 15/285 (5%)

Query: 1   MAITVNTNVTSLKAQKNLNTSASDLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG 60
           MA+ VNTN++SL AQ+NL TS   L+ S++RLSSGLR+NSAKDDAAG AI+  L S +RG
Sbjct: 1   MALIVNTNISSLNAQRNLATSNQSLSVSLQRLSSGLRVNSAKDDAAGSAIAEGLTSAIRG 60

Query: 61  LEVGMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTVQSENGANSSADLSALKAEMDQLA 120
               +RNAND IS+ Q AEGA+ +  N LQR+R+++VQ+ NG+ S  + S L+ E+DQL 
Sbjct: 61  GNQSIRNANDGISVGQTAEGALGQIANNLQRIREISVQASNGSISDTNRSQLQKEVDQLT 120

Query: 121 NEIDEIGKTTAFGTTKLLAGGFSAGKNFQVGAQDGEDIKVTVKASNKSS----------- 169
            EI  I +TT F  TKLL+G  +    FQVG     D +V+V  SN +            
Sbjct: 121 QEISRIVQTTEFNGTKLLSGASTI--TFQVGFSGSADNQVSVDTSNLAQNGAAGLNAYSG 178

Query: 170 --LSVGSLGNTTSAARASSLKKIDAAIKTIDAQRADLGAIQNRLAHNISNSANTQANVAD 227
              + G++  TTS   ++++ K+DA I  I   RA  G++QNR    +SN  N   N++ 
Sbjct: 179 TLTATGTVNVTTSGGASAAINKLDADIAQIANIRATFGSVQNRFEAVVSNLQNYVENLSA 238

Query: 228 AKSRIVDVDFAKETSQMTKNQVLQQTGSAMLAQANQLPQVALSLL 272
           +KSR++D DFA ET+Q+T+NQ+LQQ G+A+LAQAN +PQ AL+LL
Sbjct: 239 SKSRLIDADFAAETAQLTRNQILQQAGTAILAQANTVPQGALTLL 283