Pairwise Alignments

Query, 272 a.a., flagellin (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 296 a.a., flagellin domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  177 bits (450), Expect = 2e-49
 Identities = 114/295 (38%), Positives = 167/295 (56%), Gaps = 24/295 (8%)

Query: 1   MAITVNTNVTSLKAQKNLNTSASDLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG 60
           M++ +N N+ ++ A +NL++S  +L+TS+ RLSSGLR+ +A DDAAGLAI   + S +  
Sbjct: 1   MSLVINHNLMAMNAARNLSSSYGNLSTSVRRLSSGLRVGAASDDAAGLAIRELMRSDIAA 60

Query: 61  LEVGMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTVQSENGANSSADLSALKAEMDQLA 120
           L  G+RNANDAIS+ Q A+GA+      L RM++L  Q+  G  +S     + +E   +A
Sbjct: 61  LNQGVRNANDAISLIQTADGALGVIDEKLIRMKELAEQAATGTYTSDQRLIIDSEYQAMA 120

Query: 121 NEIDEIGKTTAFGTTKLLAGGFSAGKNFQVGAQDGEDIKV---------------TVKAS 165
           +EI  I  +T F    LL G  S   +   G      +KV                +  S
Sbjct: 121 SEITRIANSTDFNGIHLLNGNLSGATHDGSGLVSTGKLKVHFGSANDCSEDYYYIRIGTS 180

Query: 166 NKSSLSVGSLG--------NTTSAARASSLKKIDAAIKTIDAQRADLGAIQNRLAHNISN 217
             S+L VGS          +T SAA+A +L+ I+ AI + D  RA+LGA+QNRL + ISN
Sbjct: 181 TASALGVGSQAAEGKGKSISTQSAAQA-ALEGIENAIISKDKIRANLGALQNRLENTISN 239

Query: 218 SANTQANVADAKSRIVDVDFAKETSQMTKNQVLQQTGSAMLAQANQLPQVALSLL 272
                 N+  A+SRI DVD + E ++ T+ Q+L Q   AML+QAN LP++A+ LL
Sbjct: 240 LQIQSENLQAAESRISDVDVSSEMTEFTRQQILTQAAVAMLSQANSLPRMAMQLL 294