Pairwise Alignments

Query, 272 a.a., flagellin (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 295 a.a., flagellin domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  182 bits (462), Expect = 7e-51
 Identities = 120/293 (40%), Positives = 159/293 (54%), Gaps = 21/293 (7%)

Query: 1   MAITVNTNVTSLKAQKNLNTSASDLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG 60
           M++ VN N T+L     LN + + L  S +RLSSGLRINSA DDAAGLAI   + S +  
Sbjct: 1   MSLVVNNNFTALTTANTLNATYNKLEKSTQRLSSGLRINSAADDAAGLAIRELMRSDITA 60

Query: 61  LEVGMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTVQSENGANSSADLSALKAEMDQLA 120
           L  G+RNANDAIS+ Q A+GAM+     L RM++L  Q+  G  +S     + +E   +A
Sbjct: 61  LNQGVRNANDAISLIQTADGAMETIDEKLIRMKELAEQAATGTYNSDQRLIIDSEYQAMA 120

Query: 121 NEIDEIGKTTAFGTTKLLAGGFSAGKNFQVGAQDGEDIKVTVKASNKSS-----LSVGS- 174
           +EI  I   T F    LL G  S       G      + +   + N S+     + +GS 
Sbjct: 121 SEITRIANATDFNGIALLNGNLSNSTYDGSGLTSTGQLHIHFGSGNDSAQDYYEIRIGSV 180

Query: 175 ------LGNT---------TSAARASSLKKIDAAIKTIDAQRADLGAIQNRLAHNISNSA 219
                 LGNT         T  A   +L  ID AI + D  RA LGA+QNRL   I+N  
Sbjct: 181 SAKSLGLGNTASGNGSSISTQQAAQDALDAIDNAIISKDQIRASLGAMQNRLEATITNLE 240

Query: 220 NTQANVADAKSRIVDVDFAKETSQMTKNQVLQQTGSAMLAQANQLPQVALSLL 272
               N++ A+SRI DVD + E ++ TK QVL QT  AML+QAN LPQ+ALSL+
Sbjct: 241 TQSENLSAAESRISDVDVSLEMTEYTKQQVLAQTAVAMLSQANSLPQMALSLI 293