Pairwise Alignments

Query, 272 a.a., flagellin (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 295 a.a., flagellin domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  171 bits (432), Expect = 2e-47
 Identities = 115/301 (38%), Positives = 164/301 (54%), Gaps = 37/301 (12%)

Query: 1   MAITVNTNVTSLKAQKNLNTSASDLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG 60
           M++ +N N+ ++ A  NL+ S   LATS+ RLSSGLR+ +A DDAAGLAI   + + +  
Sbjct: 1   MSLVINHNLMAMNATNNLSLSYGKLATSVRRLSSGLRVGTAADDAAGLAIRELMRADIAS 60

Query: 61  LEVGMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTVQSENGANSSADLSALKAEMDQLA 120
           L  G RNANDAIS+ Q A+GA+      L RM++L  Q+  G  +S     + +E   +A
Sbjct: 61  LNQGARNANDAISLIQTADGALGVIDEKLIRMKELAEQAATGTYTSDQRLIIDSEYQAMA 120

Query: 121 NEIDEIGKTTAFGTTKLLAGGFSAGKNFQVGAQDGEDIKVTVKA---------------- 164
           +EI  I  +T F    LL G  S       GA DG  I+ T K                 
Sbjct: 121 SEITRIANSTDFNGVHLLNGHLS-------GAHDGSGIEATGKLKVHFGSANDCAEDYYY 173

Query: 165 -----SNKSSLSVGSLG--------NTTSAARASSLKKIDAAIKTIDAQRADLGAIQNRL 211
                +  S+L VG+          +T SAA+A +L+ +  AI + D  RA LGA+QNRL
Sbjct: 174 IKIGNATASALGVGAQAADGKGKSISTQSAAQA-ALEGLTNAIISKDKIRASLGALQNRL 232

Query: 212 AHNISNSANTQANVADAKSRIVDVDFAKETSQMTKNQVLQQTGSAMLAQANQLPQVALSL 271
            + ISN      N+  A+SRI DVD + E ++  + Q+L Q+  AML+QAN LP++AL+L
Sbjct: 233 ENTISNLQIQAENLQAAESRISDVDVSMEMTEFVRQQILSQSAVAMLSQANSLPRLALNL 292

Query: 272 L 272
           L
Sbjct: 293 L 293