Pairwise Alignments

Query, 272 a.a., flagellin (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 298 a.a., flagellin domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  177 bits (450), Expect = 2e-49
 Identities = 111/296 (37%), Positives = 163/296 (55%), Gaps = 24/296 (8%)

Query: 1   MAITVNTNVTSLKAQKNLNTSASDLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG 60
           M++ +N N+ +L A +NLN S   LATS  RLSSGLR+ +A DDAAGLAI   + + +  
Sbjct: 1   MSLVINHNMMALNASRNLNESYGRLATSTRRLSSGLRVGTAADDAAGLAIRELMRADIST 60

Query: 61  LEVGMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTVQSENGANSSADLSALKAEMDQLA 120
           +  G+RNANDAIS+ Q A+GA+Q     L RM++L  Q+  G  +S     +++E   +A
Sbjct: 61  MRQGVRNANDAISMIQTADGALQIIDEKLIRMKELAEQAATGTYNSDQRLMIESEYQAMA 120

Query: 121 NEIDEIGKTTAFGTTKLLAGGFSAGK-------------NFQVGAQDGED-IKVTVKASN 166
           +EI  I   T F    LL G  S                +F  G    ED   + +  + 
Sbjct: 121 SEITRIANATDFNGIHLLDGTLSGTHDGSGLRQTGELKIHFGTGNDSNEDYYYIKIGGAT 180

Query: 167 KSSLSVGSLGN----------TTSAARASSLKKIDAAIKTIDAQRADLGAIQNRLAHNIS 216
            S L +G+             +T +A  ++L  +D AI + D  RA LGA+QNRL + IS
Sbjct: 181 ASQLGIGNASASGAAAGGYTISTQSAAQNALTALDQAIISKDKIRAALGALQNRLENTIS 240

Query: 217 NSANTQANVADAKSRIVDVDFAKETSQMTKNQVLQQTGSAMLAQANQLPQVALSLL 272
           N      N+  ++SRI DVD A+E ++  +NQ+L Q+  AML+QAN LPQ+A+ L+
Sbjct: 241 NLTIQAENLQSSESRISDVDVAEEMTEFVRNQILTQSAVAMLSQANSLPQMAMKLI 296