Pairwise Alignments

Query, 272 a.a., flagellin (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 608 a.a., protein containing flagellin N-terminal / flagellin C-terminal from Marinobacter adhaerens HP15

 Score =  164 bits (416), Expect = 3e-45
 Identities = 96/201 (47%), Positives = 119/201 (59%), Gaps = 4/201 (1%)

Query: 1   MAITVNTNVTSLKAQKNLNTSASDLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG 60
           M   +NTN+ SL AQ+NLN S      ++ERLSSGLRINSAKDDAAGLAIS R  SQ+ G
Sbjct: 1   MPQVINTNIASLNAQRNLNASQGQANVALERLSSGLRINSAKDDAAGLAISERFQSQIAG 60

Query: 61  LEVGMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTVQSENGANSSADLSALKAEMDQLA 120
           L    RNAND IS+AQ AEGAM E TN LQR+R+L VQS N  NS +D  AL  E+ Q  
Sbjct: 61  LNQAQRNANDGISLAQTAEGAMDEITNNLQRIRELAVQSANATNSPSDRQALNQEVQQRI 120

Query: 121 NEIDEIGKTTAFGTTKLLAGGFSAGKNFQVGAQDGEDIKVT---VKASNKSSLSVGSLGN 177
            EI+ I   T+F   K+L G F   + FQVGA  GE I ++    + S   S+   + G 
Sbjct: 121 EEINRIAAQTSFNGLKVLDGTFDT-QTFQVGANTGETIAISGLDSRGSQIGSVLKETAGL 179

Query: 178 TTSAARASSLKKIDAAIKTID 198
           +T           D  + T+D
Sbjct: 180 STDVIGPGEAATTDLNVSTLD 200



 Score = 83.6 bits (205), Expect = 1e-20
 Identities = 43/83 (51%), Positives = 57/83 (68%)

Query: 190 IDAAIKTIDAQRADLGAIQNRLAHNISNSANTQANVADAKSRIVDVDFAKETSQMTKNQV 249
           ID AI TI+  RA+LGA+QNR    I+N A T  N++ + SRI D DFA E++++ + QV
Sbjct: 524 IDYAIDTINGYRAELGAVQNRFESTIANLATTSENLSASNSRIRDADFAAESAELARTQV 583

Query: 250 LQQTGSAMLAQANQLPQVALSLL 272
           LQQ G ++LAQAN  PQ  L LL
Sbjct: 584 LQQAGLSVLAQANARPQQVLQLL 606