Pairwise Alignments

Query, 272 a.a., flagellin (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 573 a.a., flagellin FliC from Pantoea sp. MT58

 Score =  162 bits (409), Expect = 2e-44
 Identities = 106/262 (40%), Positives = 145/262 (55%), Gaps = 13/262 (4%)

Query: 1   MAITVNTNVTSLKAQKNLNTSASDLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG 60
           MA  +NTN  SL  Q N+N + S L++SMERLSSGLRINSAKDDAAG AI+NR  S ++G
Sbjct: 1   MAQVINTNSLSLITQNNINKNQSALSSSMERLSSGLRINSAKDDAAGQAIANRFQSNIKG 60

Query: 61  LEVGMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTVQSENGANSSADLSALKAEMDQLA 120
           L    RNAND IS AQ  EGA+ E  N LQR+R+LTVQS+NG NS +D  +++ E+    
Sbjct: 61  LTQAARNANDGISAAQTTEGALSEINNNLQRVRELTVQSQNGTNSQSDQDSIQDEIKSRL 120

Query: 121 NEIDEIGKTTAFGTTKLLAGGFSAGKNFQVGAQDGEDIKVTVKASNKSSLSV-------- 172
           +EID +   T F    +LA         QVGA DGE I + +K  +  +L +        
Sbjct: 121 DEIDRVSGQTTFNGVNVLAK--DGTMKIQVGANDGETISIDLKQIDSKTLGLTGFNVNGS 178

Query: 173 GSLGNTTSAARASSLKKIDAAIKTIDAQRADLGAIQNRLAHNISNSANTQANVADAKSRI 232
           GS+ N T+A +A+ +     A  T DA       +   L    S+SA+  A++AD  +  
Sbjct: 179 GSVAN-TAATKANLVAAQIGAQPTPDANGVSTYTVSAGL--KASSSADVLASLADGTNVR 235

Query: 233 VDVDFAKETSQMTKNQVLQQTG 254
             ++    T   T     + TG
Sbjct: 236 ATINNGFGTPTATNYTYQKATG 257



 Score = 97.1 bits (240), Expect = 8e-25
 Identities = 51/95 (53%), Positives = 67/95 (70%)

Query: 178 TTSAARASSLKKIDAAIKTIDAQRADLGAIQNRLAHNISNSANTQANVADAKSRIVDVDF 237
           T SA  A  LK +DAAI +ID  R+ LGAIQNRL   ++N  NT  N+  A+SRI D D+
Sbjct: 477 TKSATTADPLKALDAAISSIDKFRSSLGAIQNRLNSAVTNLNNTTTNLTAAQSRIQDADY 536

Query: 238 AKETSQMTKNQVLQQTGSAMLAQANQLPQVALSLL 272
           A E S M+K Q++QQ G+++LA+ANQ+PQ  LSLL
Sbjct: 537 ATEVSNMSKAQIVQQAGNSVLAKANQVPQQVLSLL 571